Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00883 ATGGATGGCGAAGATAAGTGGCCTGGGGCCAAGAAAAGATCGAAACCGGCTGAAATCGGTTTTGATTCAGATGATGACGAGCCCATTGGGTCTGTATTTAAGCTAAGGAAGCCGCGTAACTCCAAGAAGCATAGCACGGCAGCAGAGGGCACCGGTGATGGTGGCAAGAATTCCGAGGCTAGTAGGACAAAAATGGTTGCTGCAGAAGATGATTTGGGGAGTATGGATGACACGTTGGCTAGTTTTAGGAAGAGGTTGAAGGGTCCCAAGAGAGATCAGGGATCTGGAACCACGAGgggaaaaaattcttatttgaatGTCTCTATAGATAGGTCTTTCAATGGTTCCCTTGATAATGGTATTTCTGATGGAAAATCGAGGTTGAATAATGAAGGGCAGGCTTTGGGTGATAAGGGATCTGGTTTGAATGCGGATATAAAGTACACAGACAGCTGCCAAGGAAAGGTAGAAACACCTAATGTGGATCCAACACTGATGGGAATTGAGAGTCATGCTATGTCTGATGATGATTTGGTAGCTTTGGAATGTAGGACTATGTCAAAGTATGAGAAAGGGGTGGTTTTGTTGCCTGGTGAAGGTCTACAACACTCTTCTGAAGATCATAAGGAAGACTCCTTGTCAGCTATTTTCCGAAAGGCTCAATCTAATTTGGGCAGGAGATCTCGCTCTTCAAGTTCAAAACAGAAAACTAGGAATCAAATTGTGGGTGATGACTTGAACCCTGTTTCCCATAGTGTCACTGAAACTCTGGATTCTGTGACTGAAAGGATATCTAGATCTGCCTCTGCTTCAAAATTGGTCCAAAAAATTCTGGTATCTACTAATGATTTGTCTCAAGCATCTTTAATAGATAATCAAAAGTTTGATGATGACTGTCTTCAAGAGAAAACTATTGATGGCTTTTATGATTCAGACATTCAAGATGGGTCTACAGTTGATCCTTGTTCCTCAATGAATGCCCGCAATGGCGATAGTCTGCATTTTTCTAGTGTTCAAGTTGAAaacatttgttctttttcccaCCAAAATGttgcaataaaagaaagagcTATTGATGATGGTTTAAAGCAGTGTTCTGCTATGTCAAATGATGTTAAAGAAATGGTTCATACTGAGTCTGTTCCTGTGGTAGTGGAAGGACTATTTCAGTTTACCGTGGGTGAATTTAAGAGAAGTTCCACAGAGGATTTGTCTCAACTGTGTAATGATAATACTGCACATGGTGGTTTTAATTCtatcaagaaagaaaactccATACCTCCTCCTGATTGTGAGCCCTCGAACAAATTGCATGAAAATATGTCAAACGAGAGTAATCAAAAGGTTTCTGGAAATGTTGTGAAAGGATTGGCAAGAAATGTCGCTCTAAAATTCTATGGCTGTGATACAAAAATAGATGGAGATTTGAAATCTGGAAGCACTGGAAAATTTTGCCATGATTGTAATAATAAGGATATAAAGGTTCAAGATCAAGAGCTTGTTTCAGGTTtttcacatgaaaaaaatGCTGTAACCTCTGATAGTAGTTTATCTCCTATGGCATCTAGTGAAGCCAATGAATCTGAATCGGCTGTCCAATTAAGCCACTCAGAGAAACCTTTAGAAACTTATATCTTTCCAAATGTATCTGTTGCTTCCATTGAGAAATGCAGCTTGATGTTACATCCAATTCAAACTCCTGATGATAAGTCCAAAGACGGTTCTCATACAAATGATGATTGCCCGTATGCCCCGAAAGAAATTGATGGAGCCTCTCCTCGATCTTCAGTTCCagatgaaaatgataattacaCAGAATACAGAGTCTCTGGGTCTGGTTTTGTCAGTAAAGATGGTAAGATATCTGTTGTTCAGCGTGCTGCTCGGAAGACCAAAAGGCGTAGGCATGGAGATATGGCTTATGAGGGAGATGCTGATTGGGACATTTTAATAGATGACCAAGCTTTTCTTGAAAACCAAAGTGTTGTAGATGGTGAATGCACTCTTAGAACGAAAGTGAAGCTTGATTCTTCCTTAAACCTTGTTGAAGAGTCTGAAAGTGCTGCTGCTGCAGTATCAGCAGGGCTGAAAGCTCATGCGGCTGGTCCAATTGAGAAGATAAGATTTAAGGAGATTCTGAAGCGTAAAGGTGGTCTTCAGGAGTATTTGGATTGCAGaaatcaaatattacGTCTTTGGAGTAGAGATGTCACTCGAATCTTGCCTCTTGCTGACTGTGGACTTAGTGTTACTCCTTCTAAGGATGAACCTCCCCGTTCTTCTCTTATTAGGGAAGTCTATGCATTCCTGGATCAATGTGGTTATATAAATGTCGGGATTGCCTCTCTGAAGGGGAAAGCTCAAACTAGTGCAAGGCATGATTATGAACTTGTAAAAGAGAAAGGATTTGAGGAAAGTTCCTCGGCATCCATTGCTGACTCGGAAGATGGAGTTTCCTTTATTGTTGGTCAGGCAAAAAGATCAGATACTTCCATGGAGGTTAAGAATGGTGTGACAGTATATTATGAAAACATTACTCCTGAAGTTATGGAAAGCAAGAGACACGATGACCCAGTGAGGCTGCATTTATTAGATGTAGCGCGAAACAAGGATAGAAACATTGACGAAAACCAGGAAAATGGTGGGATTCAGGCAGGATCGAATGAATTTAAACATTTGCATGCTGACAGTTCTGATCCTTCTGGCAATATTTCTTGTGAGTTTAAAGTGACTTCTATTGCAGCTAGTGAGCAGAGCACTGAATACACCTGTGTTGAATATGCATTAAATGATCAAGTAATTGATCTATCAAAGTCAGGTTCAGATACTGGAAAGAAAGTAATTGTCATAGGAGCTGGTCCTGCTGGGCTGACTGCTGCTCGTCACTTGCAACGACAGGGTTTTCCTGTGACTGTACTTGAAGGTAGGAGTAGGATAGGTGGCCGTGTATATACTGACCGCTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACTGGCGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCACTGGTTTGTGCCCAGTTAGGCCTTGAGTTGACTGTGTTAAACAGTGATTGTCCTCTTTATGACATAACAACAGGGGAAAAGGTTCCTGCAGATATGGATGAAGCATTGGAAGCTGAATACAACAGTCTTCTTGATGACATGATATTACTTGTTGCTCAGAAGGGTGAACAAGCAATGAGAATGTCTCTAGAAGATGGTTTAGAATATGCTCTGAAGAGGCGTAGAATGGCACGCTCAGGGAGAACCAATGAAGTGGTTGAACAAAATTCTGTGGATGCTTCATTTGATTCTGAGGAAAAGATTTTTCAAGAGGAGATTTTGAGTCCTCCAGAGAGGAGGGTTATGGATTGGCACTTTGCTAATTTGGAGTACGGTTGTGCTGCTCTGCTTAAGGAAGTTTCTCTTCCTTACTGGAATCAAGATGATGTATATGGAGGGTTTGGAGGAGCTCACTGTATGATTAAAGGAGGTTACAGCTCTGTTGTTGAGTCTCTAGGAGAAGGACTTGTAATTCACATGAACCATGTTGTGACAAATGTGTCCTACGGAAAGGATCCCAGTCAGTATAATAGAGTGAAAGTTTCTACTGCAAATGGAAATGACTTCTTTGGAGATGCTGTCCTGATCACTGTTCCACTTGGCTGTTTGAAGGCTGGAAGCATAAAATTCTTCCCACCTTTGCCACAATGGAAATGTTCTTCTATTCAGCGCCTTGGTTTTGGAGTTCTTAATAAAGTGATTTTGGAGTTTCCTAGTGTATTTTGGGATGATACAGTGGACTATTTTGGAGCAACAGCAGAGGAAACAAGCAAAAGAGGCAACTGTTTTATGTTCTGGAATGTCAGGAAAACTGTTGGGGCTCCTGTCCTCATAGCATTAGTCGTTGGTAAGGCAGCAATAGATGGTCAAAGTTTGAGTTCCTCTGATCATGTTAACCATGCATTAATGGTTCTTCGAAAACTTTTTGGAGAGGCTTCAGTACCTGATCCTGTGGCATATGTGGTGACTGATTGGGGTAGGGATCCATTTAGCTATGGTGCATACTCCTATGTTGCTGTCGGAGCATCTGGGGAAGATTATGATATATTAGGGAGGCCAGTTGACAACTGCTTGTTTTTTGCTGGTGAGGCAACCTGCAAAGAGCACCCTGACACGGTTGGTGGTGCAATGATGAGTGGTCTCCGGGAGGCCGTGcgaataattgatatattaagCACTGGAAATGATTATACTGCAGAAGTTGAGGCAATGGAAGCTGCACAGAGACATTCAGATACTGAAAGGGATGAAGTTAGGGATATAATGAAGAGACTTGATGCAATAGAGCTTTCTAATGTCTTGTACAAGAACTCCTTAGATGATGCTCATTTCCTAACTAAAGAAGCTTTACTGAGGGATATGTTCCTTAATGCGAAAACAAATGCTGGGCGCTTGCATGTGGCTAAACAGTTGTTGAGTCTTCCTGTGGAAAATCTGAGGTCCTTTGCTGGGAGTAAAGAGGGCCTCACCATTCTTAACTCGTGGATACTGGACTCAATGGGGAAGGATGGGACCCAGCTCTTGCGACAGTGTGTGCGTCTTCTTGTGCTTGTTTCAACTGATTTACTTGCTGTGCGATTATCAGGCATAGGGAAAACAGTTAAGGAAAAAGTTTGTGTGCATACCAGCCGTGATATTCGAGCTATAGCAAGCCAATTGGTTAGTGTATGGCTAGAAATCTTCCGCAAGGAAAAAGCTTCTTATGGTGGACTGAAGTTTTCAAGGCAAGCAACTGCTATTGATTTATCAAAGAGAAAACCTCTTAAGGATTCAACCTCAGGAAAGCCACCTCTAAGCATGCATCATGCTGCTTATGAGAGTAAAGGAGGCTTGCCTCCACCTACATCTGGTGGAAGCGATTCACCTGGAATATCAAATGTGAAGAAACCAGAAAGCAAACAAGTGAGACAACATACAACAAACGACTCAAAGCTTGAGGTCAGTTCTTCCAGGTCTCAAGGTTCAACAGACAAAGTTGTTACGGAGAAGGTAGATAATTTCTATGCTATGTCTGAAGAAGAACAGGCAGCCATTGCTGCTGCAGAAGCTGCCCGTGCTAAGGCTCTTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCCAGGTGTAATACACTGCTGCAGCTTCCGAAGATACCTTCTTTCCATAAGTTTGCTAGACAGGGGCAATCTTCACAAAATGACGAGTGTGATAGTCGAAAAAAGTGGTCTGGTGGTGTGCTGGGAAGGCAAGACTGTAATTCAGAGATAGATTCTAGGAATTGCAGGGTTAGGAATTGGTCTGTTGATTTCTCTTCTGCTTGTGTTAACCTAGACAATTCTAGAATGTCGGTGGATAACCTTTCACAACGGAGTCATTCAAATGAGATTGCCAGCCATTTGAACTTCAGAGAGCACTCAGGAGAAAGTGTCGCTGTGGACagtaatatatttacaaaGGCATGGATTGACACAGCTGGTAGTGTGGGGATCAAAGACTATCATGCCATTGAGAGATGGCAATCTCAAGCAGCTGCAGCTAATTCTGAATTTTCTAATCCAACCATACATTTAAATGACGAGGAGTATTCAAACACCTATGCAAGACTACCCAGCTGGAAACGTGATGGCATGGCAAATGAGAGCTCGATTTCACAGGTTACTGTAAATAATGAGGCTTTAAAAAATCATCCTCGAGGAGCGGATCATATCAAACAGGCTGTTGTGGATTATGTTGCATCTCTGCTTATGCCCCTTTATAAGGCAAGGAAACTAGACAAAGACGGGTACAAGGctataatgaagaaaagtgcAACCAAgGTGATGGAGCAAGCCACAGATGCTGAAAAAGCCATGGTTGTTCATGAGTTTCTTGATTTTAAGCGAAAGAATAAGATCCGCTCCTTTGTGgataaattgattgaaagaCACATGGCAATGAAACCGAACGTGAAACCTTA 6029 0.4118 MDGEDKWPGAKKRSKPAEIGFDSDDDEPIGSVFKLRKPRNSKKHSTAAEGTGDGGKNSEASRTKMVAAEDDLGSMDDTLASFRKRLKGPKRDQGSGTTRGKNSYLNVSIDRSFNGSLDNGISDGKSRLNNEGQALGDKGSGLNADIKYTDSCQGKVETPNVDPTLMGIESHAMSDDDLVALECRTMSKYEKGVVLLPGEGLQHSSEDHKEDSLSAIFRKAQSNLGRRSRSSSSKQKTRNQIVGDDLNPVSHSVTETLDSVTERISRSASASKLVQKILVSTNDLSQASLIDNQKFDDDCLQEKTIDGFYDSDIQDGSTVDPCSSMNARNGDSLHFSSVQVENICSFSHQNVAIKERAIDDGLKQCSAMSNDVKEMVHTESVPVVVEGLFQFTVGEFKRSSTEDLSQLCNDNTAHGGFNSIKKENSIPPPDCEPSNKLHENMSNESNQKVSGNVVKGLARNVALKFYGCDTKIDGDLKSGSTGKFCHDCNNKDIKVQDQELVSGFSHEKNAVTSDSSLSPMASSEANESESAVQLSHSEKPLETYIFPNVSVASIEKCSLMLHPIQTPDDKSKDGSHTNDDCPYAPKEIDGASPRSSVPDENDNYTEYRVSGSGFVSKDGKISVVQRAARKTKRRRHGDMAYEGDADWDILIDDQAFLENQSVVDGECTLRTKVKLDSSLNLVEESESAAAAVSAGLKAHAAGPIEKIRFKEILKRKGGLQEYLDCRNQILRLWSRDVTRILPLADCGLSVTPSKDEPPRSSLIREVYAFLDQCGYINVGIASLKGKAQTSARHDYELVKEKGFEESSSASIADSEDGVSFIVGQAKRSDTSMEVKNGVTVYYENITPEVMESKRHDDPVRLHLLDVARNKDRNIDENQENGGIQAGSNEFKHLHADSSDPSGNISCEFKVTSIAASEQSTEYTCVEYALNDQVIDLSKSGSDTGKKVIVIGAGPAGLTAARHLQRQGFPVTVLEGRSRIGGRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDITTGEKVPADMDEALEAEYNSLLDDMILLVAQKGEQAMRMSLEDGLEYALKRRRMARSGRTNEVVEQNSVDASFDSEEKIFQEEILSPPERRVMDWHFANLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGLVIHMNHVVTNVSYGKDPSQYNRVKVSTANGNDFFGDAVLITVPLGCLKAGSIKFFPPLPQWKCSSIQRLGFGVLNKVILEFPSVFWDDTVDYFGATAEETSKRGNCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSSDHVNHALMVLRKLFGEASVPDPVAYVVTDWGRDPFSYGAYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSTGNDYTAEVEAMEAAQRHSDTERDEVRDIMKRLDAIELSNVLYKNSLDDAHFLTKEALLRDMFLNAKTNAGRLHVAKQLLSLPVENLRSFAGSKEGLTILNSWILDSMGKDGTQLLRQCVRLLVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEIFRKEKASYGGLKFSRQATAIDLSKRKPLKDSTSGKPPLSMHHAAYESKGGLPPPTSGGSDSPGISNVKKPESKQVRQHTTNDSKLEVSSSRSQGSTDKVVTEKVDNFYAMSEEEQAAIAAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARQGQSSQNDECDSRKKWSGGVLGRQDCNSEIDSRNCRVRNWSVDFSSACVNLDNSRMSVDNLSQRSHSNEIASHLNFREHSGESVAVDSNIFTKAWIDTAGSVGIKDYHAIERWQSQAAAANSEFSNPTIHLNDEEYSNTYARLPSWKRDGMANESSISQVTVNNEALKNHPRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMVVHEFLDFKRKNKIRSFVDKLIERHMAMKPNVKP 2009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00883 2009 Gene3D - 686 791 IPR036388 -
Bva10g00883 2009 Gene3D - 1044 1374 - -
Bva10g00883 2009 SUPERFAMILY FAD/NAD(P)-binding domain 942 1421 IPR036188 -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 565 604 - -
Bva10g00883 2009 SUPERFAMILY FAD-linked reductases, C-terminal domain 1257 1368 - -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 63 94 - -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 1 33 - -
Bva10g00883 2009 Gene3D - 947 1417 IPR036188 -
Bva10g00883 2009 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 611 2006 - -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 510 534 - -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 1672 1689 - -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 566 583 - -
Bva10g00883 2009 PANTHER FLAVIN MONOAMINE OXIDASE 611 2006 - -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 220 249 - -
Bva10g00883 2009 ProSiteProfiles SWIRM domain profile. 687 787 IPR007526 GO:0005515
Bva10g00883 2009 Pfam SWIRM domain 699 777 IPR007526 GO:0005515
Bva10g00883 2009 SUPERFAMILY Homeodomain-like 687 783 IPR009057 -
Bva10g00883 2009 Pfam Flavin containing amine oxidoreductase 955 1419 IPR002937 GO:0016491
Bva10g00883 2009 MobiDBLite consensus disorder prediction 1 103 - -
Bva10g00883 2009 MobiDBLite consensus disorder prediction 1615 1689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00883 Bva-Chr10 6737641 6748193 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Bva10g00883 Amino_oxidase 2.5e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00883 10 6737641 6748193 Bva10g00883 10 6737641 6748193 ECH