Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00857 ATGTCCTCCATCAAAATCAGTCTCCTCGTAATAGCTTTTCTTGCAGCCACACCCTCCCAAGCTCACCCTGGTCTGGGTTTTGGTTGGGGTGGTCACCCTGGAAATGGGAGAAGTCCTTTTGCTGCTCTTTCTCCTGATTTCTATCAGTTCTCGTGTCCCCAAGCTAATGACATTGTCATGTCAGTGTTAGAGAAAGCCATTGCCAAGGATCCCAGAATGGCCGCCTCTCTGCTTAGGCTTCACTTCCATGACTGCTTCGTGCAGGGCTGCGATGCATCAATTTTACTTGATGATAGCGCCACTATCACAAGTGAGAAGAATTCTGGACCAAACAAAAATTCTGTACGAGGTTTTGAAGTGATTGATGAGATTAAATCTAAGTTAGAAGAAGCGTGCCCCGGGACTGTCTCCTGCGCAGACATTCTTGCCCTTGCTGCCAGGGGCTCCACTGTTCTTAGGGGAGGACCCAGCTGGGAGCTCCCATTAGGCAGGAGAGACTCAACAACAGCAAGCCTAAGTGGCTCAAACAGAAACATTCCCCCACCTAATTCTACCATTGGAAACCTTGTCACATTTTTCAAGCGCCAAGGCCTTGATGAAGTTGATCTTGTTGCCCTATCAgGTGCGCATACCATTGGAGTTGCAAGGTGTGTTACATTCAAGCAGAGACTGTACAACCAACCAGATGAGACCCTTGAAAAATCCTTCTactttggtctcaaaactGTTTGCCCACAATCAGGTGGCGACAACAACATCTCTCCCTTAGACTTTCCCTCCCCAACAACTTTTGACAATAGCTATTTCAATCTCATTCTGTGGGGAAAAGGGTTACTGAATTCAGATCAAGTGCTTCTCAGTGGGACTGTCAAGGAGACTCAGCAACTGGTCAAGCAATACGCGCAAGATAACACCCTCTTCTATAACCACTTTGCCAAGTCCATGATCAAGATGGGTAATATCAGCCCTCTCACCGGTTCTAATGGTCAAGTGAGGAAGAACTGCCGCCGTGTTAATTA 1019 0.4652 MSSIKISLLVIAFLAATPSQAHPGLGFGWGGHPGNGRSPFAALSPDFYQFSCPQANDIVMSVLEKAIAKDPRMAASLLRLHFHDCFVQGCDASILLDDSATITSEKNSGPNKNSVRGFEVIDEIKSKLEEACPGTVSCADILALAARGSTVLRGGPSWELPLGRRDSTTASLSGSNRNIPPPNSTIGNLVTFFKRQGLDEVDLVALSGAHTIGVARCVTFKQRLYNQPDETLEKSFYFGLKTVCPQSGGDNNISPLDFPSPTTFDNSYFNLILWGKGLLNSDQVLLSGTVKETQQLVKQYAQDNTLFYNHFAKSMIKMGNISPLTGSNGQVRKNCRRVN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00857 339 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Bva10g00857 339 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 PANTHER PEROXIDASE 29 338 - -
Bva10g00857 339 PANTHER PEROXIDASE 72-RELATED 29 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 SUPERFAMILY Heme-dependent peroxidases 43 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 Pfam Peroxidase 61 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 Gene3D Peroxidase, domain 2 180 319 - -
Bva10g00857 339 CDD secretory_peroxidase 43 338 IPR033905 GO:0004601|GO:0042744
Bva10g00857 339 ProSiteProfiles Plant heme peroxidase family profile. 42 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva10g00857 339 Gene3D - 47 339 - -
Bva10g00857 339 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00857 Bva-Chr10 6587157 6588823 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00857 10 6587157 6588823 Bva10g00857 10 6587157 6588823 ECH