Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00853 ATGGACACAAATGGGCCTGGCTCAAAGAATATGAGGTTCAGAATTCTTCTcccatttttttctcaactcatAATCTTCTCAACAGGAGGAGCTAGGATTACAATTTTCATTGGAAAGTTGAGCGGCATCATGGGATCAGCTTGTTGTGTTGCTGCAAAGGATCATACTATCCCCATTAGATCCAGGGATGAAGGTTTGCATAGGAATATTGTATGTTCACCATCATGTAGTTTTCAGTGGGATAGTCGTGGGCGTGTGGCTGGTGAAAATGAGAATCTTTCTTGTCACACATCTCATAGAATCAGCAGAAATGTTAGCATGGAGTTCAAAGGATCATTAAGTTCTGAAAGAGGTAATTTATCTGATGGGGGAAGCACCCTGGAGATATCAGTAACTCCTATTTCTCAGAAGTCCCCTGTTCATGAGGCTTTAGTTGTGAATCCAGTGACTCCATCATCTGATCTGTCCATGGCGAGCAATTGTTCTACAGTGgTGAAGAATCTATCAGAATCACCAGAAATTGCGGAGTCTTCAGTTCTGAATCTTTCGTTTTCGATACCTTCAGTTTTCTCAACGCCTACAGTAGATCCTTTGCCCAATCataattatcatcatcatctttccAACTCGGTGCCATCAAGATGGGCTCATCGTTCTCCTGGACACCCACTATTGAGACAGATTTCTGATAGTCGAATCCTGGGATTGAAATCACCGGACAACTCTATGTCTGAGGGAAGGCCATCATTTGTGCTCTCCACTTGCAGTAATGACATGGCAAATGGATCACAAGGCGGGTCTTCCGATGGCTGGTCCATGCGCACCTTCTCTGAGCTTGTGGCCTCGTCTCAAAGAGAAAGGTGGTCTTTTGACAGTGAATGCTTGGGTTCTAGTCGTCACAAGATAAGTGGATCCAGTAGCAGATTTTCACATTCTCCTTCGATGGAGCAACAATCTTGCGGGGCTTGTTCCAAGCTTTTGACTGAAAGATCTTCATGGAGCAACCATAAATTTATTGCCAGCAACGACGTTGCGGTGGTTGCCGTCCTGGTCTGTGGGCACGTGTACCATGCTGAGTGCTTAGAGACTATGACGCCAGAGGCAGATAGATATGATCCAGCATGTCCAATATGCACGGTTGGAGACAAGCAAGTGTCCATGTTATCCAGAAAAGGTTTTCGTGCCGAACCAGATGTAAAGGCAAAAAACCACAAAATATCCAAAAACCGGATAATTGATAGCTATGTTGATTGTGGATTTGATGTTTTTGACCGTCAAAAAGATATTGAATGGAGAGGGAAAGTTCCAAAGATGGAACCTAGCTCTAGTGGCAGGAGCTCATTTGGAAAGCCAAAGCCCTTCTTAAGACGGCATTTTTCACTTGGCTCTAAGTGGAGCCGATCTCTGCCAGAGAATGATTCTGCCAGGAAGAAGGGCTTTTGGGCAAGATATCGTAAAGATTG 1463 0.4327 MDTNGPGSKNMRFRILLPFFSQLIIFSTGGARITIFIGKLSGIMGSACCVAAKDHTIPIRSRDEGLHRNIVCSPSCSFQWDSRGRVAGENENLSCHTSHRISRNVSMEFKGSLSSERGNLSDGGSTLEISVTPISQKSPVHEALVVNPVTPSSDLSMASNCSTVVKNLSESPEIAESSVLNLSFSIPSVFSTPTVDPLPNHNYHHHLSNSVPSRWAHRSPGHPLLRQISDSRILGLKSPDNSMSEGRPSFVLSTCSNDMANGSQGGSSDGWSMRTFSELVASSQRERWSFDSECLGSSRHKISGSSSRFSHSPSMEQQSCGACSKLLTERSSWSNHKFIASNDVAVVAVLVCGHVYHAECLETMTPEADRYDPACPICTVGDKQVSMLSRKGFRAEPDVKAKNHKISKNRIIDSYVDCGFDVFDRQKDIEWRGKVPKMEPSSSGRSSFGKPKPFLRRHFSLGSKWSRSLPENDSARKKGFWARYRKD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00853 487 MobiDBLite consensus disorder prediction 470 487 - -
Bva10g00853 487 MobiDBLite consensus disorder prediction 435 487 - -
Bva10g00853 487 SUPERFAMILY RING/U-box 316 379 - -
Bva10g00853 487 ProSiteProfiles Zinc finger RING-type profile. 320 379 IPR001841 -
Bva10g00853 487 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 44 481 - -
Bva10g00853 487 PANTHER EXPRESSED PROTEIN 44 481 - -
Bva10g00853 487 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 302 380 IPR013083 -
Bva10g00853 487 SMART ring_2 320 378 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00853 Bva-Chr10 6566992 6572667 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00853 10 6566992 6572667 Bva10g00853 10 6566992 6572667 ECH