Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00846 ATGCTGGACCCGCTCAAAGGCGACGTGGCTGCTTCTCCAAATGACCCGGAAAATGAAACGCATGTGAGACGTGTGCTTGTGATGCCCCACTCTGTCTCCTTCCGGTTCCGgaatatcttttatctttattttttcccctcgGCGGCTCTCCATTACGATTACAAGAATTTTCACCGCTCATCCTCTCAGTTACTCCTCTCTGCCGACGCCATCTACCATACATACATTATGCATACTCTTCGATCCGAGATTATTGACATGTCAGGGCCGCTTGATCGGTTCGCACGGCCTTGCTTTGAAGGGTTCTCTGGCCATGATGAACGAAGAGAGAGGAAATCAGATTTTGAGAATTCAGAGGATGATAGGCGGACAAGAATTGGCAgtctgaaaaagaaagcaataaaTGCATCTAGCAAATTCAGGCATTCTCTTAAGAAGAAAAGCAGGAGAAGAAGTACCAGCCGGAACAATTCCGTTTCCATTGAGGATGTTCGAGATGTTGAGGAGCTTCAAGCAGTGGATGCATTTCGGCAAGCACTCATGTCAGAAGAATTGTTGCCTCCGAGACTTGATGACTATCATATGTTATTGAGATTCCTGAAAGCAAGGAAGTTTGATATTGAAAGAGCAAAGCACATGTGGTCCAACATGATTCAATGGAGGAAGGATTATGGCACTGACACAATTATGGAGGATTTTGAGTACAATGAGTTGAATGAAGTTCTGCAGTACTATCCGCATGGTTATCACGGCGTGGATAGGGAAGGAAGACCTGTATATATTGAGAGGCTAGGAAAAGTTGATCCAAATAAGCTTATGCAAGTAACTACCATGGATAGATATCTAAGATACCATGTGCAGGGTTTTGAGAAAACATTTGCTGTTAAGTTTCCAGCTTGCTCTATTGCCGCAAAGAGACACATAGATTCGAGTACAGCAATTTTGGATGTTCAAGGCGTGGGTTTAAAAAACTTCACCAAGTCTGCACGCGAACTCATCATGCGGCTGCAGAAGATTGATGGTGACTACTATCCTGAAACACTATACCGGATGTTTATCATCAATGCTGGTCCTGGTTTTAAGCTGCTCTGGAACACTGTAAAAACATTTCTTGATCCCAAAACAACTTCAAAGATTCATGTTCTTGGCAACAAGTTCCAGAGTAAATTACTTGAAATAATTGACGCAAGTGAGTTGCCAGAATTTTTAGGTGGTAGTTGTTATTGTGTTGATCAGGGCGGTTGTATGAGGTCTGATAAAGGGCCATGGCAAGATCCCGATATTTTAAAGATGGTCCTTAGTGGTGAAGTACATAGTAGACAGATAGTAACTGTTTCTAATAGTGAGAGGACAGCGATTGAATGTGATAAGACTTCATATGCAACGATAAAAAGTAGTGATACATCTACAGCGGAATCAGGGTCTGAAGCTGAAGATATTGCTTCCCCAAAAGCAAGTGGGAACTATACAAACCCTAGGTTGACTCCCGTCCATGAAGAAGCAAGATTGGGCGTTAAGGTTAGTCATGCTGGCGGTTTCTCTGAGAATGATGAGTGTGTTCCTATGGTTGACAAGGCTGTCGATGTTGGATGGAAAGAGAAGCAAGCAATACCTCAAAGCTCATGTAACTCCATAGACGCAAATTCGCCAAGTACTGAAAAATCTCGTGATAGAATCTGTGCTTATATCTGGGCTGTTATAGTGGGTTTCTTTGTTGCCCTCTTTACTTTTGTCTCTTCATTGCCATTTCGTGTCACTAAGGGAAATCAGAAATCTGGATCTGACTCGGCTCATAATATGCCGAACATGACCGTAAAATCAATTTCCGAGGAGGAAACTCGTCTTCCTTCTCCTGCACCAGGATTCACAACGGCAGACCTGCTCTCATCTGCCATAAAACGGATAAGTGAGCTTGAACAGAAGGTTGACGTGCTACAGTCAAAACCTAATGTGATGCCACATGAGAAGGAGGAGCTACTAAATGCTGCCGTTTATCGTGTGGATGCACTGGAAGCAGAGTTGATTGCTACTAAGAAGGCTTTGTACGAAGCTTTGATGAGACAAGAAGAACTTCTGGCATACATAGATAGGCAGGAAAACATCAAATTAAGGaaaaagaaggCTTGCTGTTG 2132 0.4212 MLDPLKGDVAASPNDPENETHVRRVLVMPHSVSFRFRNIFYLYFFPSAALHYDYKNFHRSSSQLLLSADAIYHTYIMHTLRSEIIDMSGPLDRFARPCFEGFSGHDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLKKKSRRRSTSRNNSVSIEDVRDVEELQAVDAFRQALMSEELLPPRLDDYHMLLRFLKARKFDIERAKHMWSNMIQWRKDYGTDTIMEDFEYNELNEVLQYYPHGYHGVDREGRPVYIERLGKVDPNKLMQVTTMDRYLRYHVQGFEKTFAVKFPACSIAAKRHIDSSTAILDVQGVGLKNFTKSARELIMRLQKIDGDYYPETLYRMFIINAGPGFKLLWNTVKTFLDPKTTSKIHVLGNKFQSKLLEIIDASELPEFLGGSCYCVDQGGCMRSDKGPWQDPDILKMVLSGEVHSRQIVTVSNSERTAIECDKTSYATIKSSDTSTAESGSEAEDIASPKASGNYTNPRLTPVHEEARLGVKVSHAGGFSENDECVPMVDKAVDVGWKEKQAIPQSSCNSIDANSPSTEKSRDRICAYIWAVIVGFFVALFTFVSSLPFRVTKGNQKSGSDSAHNMPNMTVKSISEEETRLPSPAPGFTTADLLSSAIKRISELEQKVDVLQSKPNVMPHEKEELLNAAVYRVDALEAELIATKKALYEALMRQEELLAYIDRQENIKLRKKKACC 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00846 710 MobiDBLite consensus disorder prediction 109 128 - -
Bva10g00846 710 Coils Coil 628 648 - -
Bva10g00846 710 CDD SEC14 238 405 IPR001251 -
Bva10g00846 710 MobiDBLite consensus disorder prediction 138 153 - -
Bva10g00846 710 SUPERFAMILY CRAL/TRIO domain 236 431 IPR036865 -
Bva10g00846 710 MobiDBLite consensus disorder prediction 464 494 - -
Bva10g00846 710 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 89 707 - -
Bva10g00846 710 SMART sec14_4 237 408 IPR001251 -
Bva10g00846 710 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 237 411 IPR001251 -
Bva10g00846 710 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 89 707 - -
Bva10g00846 710 Pfam CRAL/TRIO domain 243 405 IPR001251 -
Bva10g00846 710 MobiDBLite consensus disorder prediction 138 159 - -
Bva10g00846 710 Gene3D - 225 435 IPR036865 -
Bva10g00846 710 Pfam CRAL/TRIO, N-terminal domain 193 216 IPR011074 -
Bva10g00846 710 PRINTS Cellular retinaldehyde-binding protein signature 195 217 - -
Bva10g00846 710 PRINTS Cellular retinaldehyde-binding protein signature 364 383 - -
Bva10g00846 710 SUPERFAMILY CRAL/TRIO N-terminal domain 167 233 IPR036273 -
Bva10g00846 710 Gene3D - 141 224 - -
Bva10g00846 710 SMART CRAL_TRIO_N_2 192 217 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00846 Bva-Chr10 6522386 6527141 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00846 10 6522386 6527141 Bva10g00846 10 6522386 6527141 ECH