Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00841 ATGGATTCCAGGTGCGCGACCTTGGGTGCCAATGCCAATCTTGTTAGAGCTCGCAAGACAGCTGGAAGAGATAGAGGTACTGGGTTCTGGGGTGAAACTACAAGGGGGAGTCTGAACAACAGGTTTTTGAGTATTCAGTCATGGAAGGGTTCAAAAACTGAAATCAATAATAGGAAGTTGAAGCCTGGCGTTGCTTACTCTGTTTTGACAGAAATCAACGAAGAGCCTGGGCTAGTACAGTCAAAACCCTTTTCTGAGACTCTAAAAGTAGACCCCAAAAAAGTAGCTGCCATCATATTGGGTGGAGGTGCTGGGACTCGCCTCTTTCCTCTCACTAGCCGAAGAGCCAAGCCCGCCGTTCCGATTGGAGGGTGTTACAGACTCATAGATATCCCAATGAGCAATTGCATCAACAGCGGCAtcagaaaaatattcattttaacgCAGTTCAACTCTTTTTCCCTCAATCGTCACCTCTCTCGcatctataatttaaaaaatggcGTGAATTTTGGAGATGGGTTTGTTGAGGTCTTGGCTGCAACTCAAACACCTGGAGAAGCTGGGAAGAAATGGTTCCAAGGAACAGCGGATGCTGTGAGGCAATTTATATGGGTATTTGAGGATGCCAAGAACAAGAATATTGAGCATATATTGATACTTTCCGGCGATCATCTTTACAGGATGGACTATATAGACTTTGTGCAGAAACATATCGACACAAATGCTGATATCACAGTTTCATGTGTACCCATGGATGAGAGCCGTGCATCAGATTATGGGTTaatgaaaatagataaaaagggACAGATTATACAGTTTGCAGAAAAACCGAAGGGTTCAGATCTGAAAGCAATGAAAGTTGACACCACACTTCTGGGGTTATCTGAACAAGAAGCAACGGAAAATCCTTACATTGCATCAATGGGTGTTTACGTATTTAGAACTGAAACCCTACTGAAACTATTGAGATGGAGCTGTCCTTCATGTAATGACTTTGGGTCTGAAATTATTCCATCTGCACTGAGGGAGCACAATGTCAAAGCATATTTGTTCAATGAGTATTGGGAAGATATTGGAACTATAAAGTCCTTCTTTGATGCCAATTTGGCCCTAACGAAACAGCCTCCGAAGTTCGAATTCTATGATCCAAAGACACCTTTCTACACTTCTCCAAGGAACTTACCACCCACTAAAGTAGAAAATTGCAGGATAGTGGATTCAATTATTTCTCATGGTTGCTTCTTGAGAGACTGTAGTGTTCAAAATTCTATTATTGGTCTGCGCTCACGACTGGAATCTGGAGTAGGATTTCAGGAAACTATGATGATGGGCGCAGACTACTATCAAACCGAGTCTGAAATTGCATCTCTACTGGCAGACGGGCACGTTCCTATTGGAGTTGGAGAGAATACCAAAATCAGGAAATGTATAATCGACAAGAATGCCAAAATAGGAAAAGATGTGATTATTGCAAACCGCGACGGTGTTCAAGAAGCAGACAGACCTGAGGACGGATTCTACATCAGGTCGGGCATCACTATCATCCTCAAAAATGCAACAATCGAAGATGGAACAATTATCTA 1586 0.4142 MDSRCATLGANANLVRARKTAGRDRGTGFWGETTRGSLNNRFLSIQSWKGSKTEINNRKLKPGVAYSVLTEINEEPGLVQSKPFSETLKVDPKKVAAIILGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRIYNLKNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNIEHILILSGDHLYRMDYIDFVQKHIDTNADITVSCVPMDESRASDYGLMKIDKKGQIIQFAEKPKGSDLKAMKVDTTLLGLSEQEATENPYIASMGVYVFRTETLLKLLRWSCPSCNDFGSEIIPSALREHNVKAYLFNEYWEDIGTIKSFFDANLALTKQPPKFEFYDPKTPFYTSPRNLPPTKVENCRIVDSIISHGCFLRDCSVQNSIIGLRSRLESGVGFQETMMMGADYYQTESEIASLLADGHVPIGVGENTKIRKCIIDKNAKIGKDVIIANRDGVQEADRPEDGFYIRSGITIILKNATIEDGTII 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00841 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 192 200 IPR005836 GO:0005978|GO:0008878
Bva10g00841 528 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 528 IPR011831 GO:0005978|GO:0008878
Bva10g00841 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 307 317 IPR005836 GO:0005978|GO:0008878
Bva10g00841 528 SUPERFAMILY Trimeric LpxA-like enzymes 391 528 IPR011004 -
Bva10g00841 528 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 528 - -
Bva10g00841 528 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 84 393 IPR029044 -
Bva10g00841 528 CDD LbH_G1P_AT_C 396 522 - -
Bva10g00841 528 Gene3D Hexapeptide repeat proteins 394 528 - -
Bva10g00841 528 Pfam Nucleotidyl transferase 97 374 IPR005835 GO:0009058|GO:0016779
Bva10g00841 528 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 489 IPR029044 -
Bva10g00841 528 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 95 492 IPR011831 GO:0005978|GO:0008878
Bva10g00841 528 CDD ADP_Glucose_PP 97 359 - -
Bva10g00841 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 101 120 IPR005836 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00841 Bva-Chr10 6502504 6507059 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00841 10 6502504 6507059 Bva06g01982 06 13342501 13346181 BWGD
Bva10g00841 10 6502504 6507059 Bva10g00841 10 6502504 6507059 ECH