Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00840 ATGAAGCATCGGGCATTTCTGGTTTTGTTAGTAGCAATGGTGATACTGATACATGATGAAGAGGGGAATTTACTGGGAGTAGAAGCAGAGGATGGGTTCGTAAAAACCAGAGGAGTGCAGCTTTTGTTGAATGGAAGCCCCTACTACATAAACGGGTTCAATGCCTACTGGCTTATGTATGTGGCCTCTGACCCATCTCAGAGGGACAAAGTTTCATCTGCGTTTCAAGAGGCTAGAAATCATGGCCTCAACTTAGCCAGGACTTGGGCTTTCAGTGATGGTGGATACAGACCCTTGCAGTACTCTCCTGGATCCTACAACGAACAAATGTTTCAGGGGTTGGACTTTGTGATATCTGAAGCCAGAAAGTATGAAATCAAGCTGGTTTTGAGTTTGGTGAATAACTATGACAACTTAGGAGGAAAGAAACAGTATGTGGACTGGGCAAGAAGTCATGGTCAGTCCATAAATTCTGAAGATGGTTTCTTTACAAATCCCGTAGTGAAGGGATACTATAAAAACCATATGAAGGCTGTACTCACAAGACGTAACAGTGTCACTGGAGTTGCTTACAAGGATGACCCAACTATAATGGCTTGGGAACTCATGAATGAGATTCGCTGCCCTTCAGATCAATCTGGAAAGACCGTTCAGGCTTGGATTACAGAGATGGCATCTTACTTGAAATCCATAGATGGAAATCACTTGCTAGAAGCTGGTTTGGAGGGTTTTTATGGCCAATCCAAGAAGCAGTCTAATCCCAACTTTTCAGTAGGAACGGATTTCATTGCAAACAATCAAATCcctggcattgattttgctACAGTCCACTCGTATCCTGATCAATGGCTATCTGGTGCTGGATATGAAAACCAAATCTCATTTTTGGATAGCTGGCTCCACGATCACATTCAAGATGCACAGACCATCCTTGGAAAGCCACTTCTCGTTGCCGAGTTTGGCACATCAATGAGAAGTTCTAACTCAAACCAAAGGGACCAGTTATTCAATAAGGTCTATTCTGCTATCTATAGTTCAGCAAGCAGTGGCGGGGCTGCTGTTGGTGGCTTATTCTGGCAACTTCTAGCTCAAGATATGGACTCTTTTCGAGATGGTTATGAGGTGGTCTTGAGCGAGAATCCCTCAACAGCTTCTTTAATTTCTCTGGAATCTCAAAAGCTGAATCGAATTCGGAAGATGTACGCCAGACTTAGAAACATTGAGAAGTGGAAAGAAGCAAGGGAAACCAGAAGCTCACAAGGGTGGACTGGCACTAACGGTCATGCTTG 1289 0.4313 MKHRAFLVLLVAMVILIHDEEGNLLGVEAEDGFVKTRGVQLLLNGSPYYINGFNAYWLMYVASDPSQRDKVSSAFQEARNHGLNLARTWAFSDGGYRPLQYSPGSYNEQMFQGLDFVISEARKYEIKLVLSLVNNYDNLGGKKQYVDWARSHGQSINSEDGFFTNPVVKGYYKNHMKAVLTRRNSVTGVAYKDDPTIMAWELMNEIRCPSDQSGKTVQAWITEMASYLKSIDGNHLLEAGLEGFYGQSKKQSNPNFSVGTDFIANNQIPGIDFATVHSYPDQWLSGAGYENQISFLDSWLHDHIQDAQTILGKPLLVAEFGTSMRSSNSNQRDQLFNKVYSAIYSSASSGGAAVGGLFWQLLAQDMDSFRDGYEVVLSENPSTASLISLESQKLNRIRKMYARLRNIEKWKEARETRSSQGWTGTNGHA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00840 429 Gene3D Glycosidases 29 398 - -
Bva10g00840 429 PANTHER - 9 418 IPR045053 GO:0004553
Bva10g00840 429 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 9 418 - -
Bva10g00840 429 Pfam Cellulase (glycosyl hydrolase family 5) 45 336 IPR001547 GO:0004553|GO:0071704
Bva10g00840 429 SUPERFAMILY (Trans)glycosidases 33 386 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00840 Bva-Chr10 6500858 6503445 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00840 10 6500858 6503445 Bva06g01983 06 13346174 13348422 BWGD
Bva10g00840 10 6500858 6503445 Bva10g00840 10 6500858 6503445 ECH