Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00820 ATGGACCAAGGCCGCGCGACCAATGTCGCCACCCCTGGCGGTGGCGCCGTTGGAGTTCAGATCCAACACTCTCGCAGGGTCCTCCCAGATTTTCTTCAGAGTGTCAATCTCAAGTACGTGAAATTAGGGTACCATTACTTAATTTCCAATTTGTTCACCTTATGCTTCATACCTTTGATCTTTGTAACCTTGATTGAGGTGTCCCAAATGGACCTCGAAGATTTACGGCAATTGTGGCTTCACCTTCAGTACAATCTTGTGAGTATTGTAATTTGCTCTGCTTTCTTGGTCTTTGGCCTGACCGTCTATATAACGACTCGTCCTCGCCCCGTTTATCTTGTCGATTTCTCTTGTTATCGCCCTCCCGATCATCTCAAAGCTCCCTTTGACCGATTCATGGAGCACTCCAGGCTCACCGGTGACTTCGACGATTCATCCCTCGAATTTCAGCGTAAAATCTTGGAGCGCTCCGGGCTCGGCGAGGAAACTTACGTTCCTGAGGCGATGCACTTTATCCCTCCCAGGCCGAGCATGGCGGCAGCCAGGGAGGAGGCTGAGCAGGTCATGTATGGTGCATTGGATAATCTTTTCCTTAATACCAATGTGAAGCCTAAGGACATTGGTATTCTTGTTGTGAATTGTAGCTTGTTTAACCCAACACCCTCACTTTCAGCCATGATtgttaacaaatataaattgagaGGTAATATTAGGAGCTTTAATTTGGGCGGAATGGGATGCAGTGCTGGGGTTATAGCTCTTGATCTTGCCAAGGACTTATTGCAAGTTCACAGGAATACTTATGCTGTTGTTGTCAGTACAGAAAACATCACTCAGAATTGGTATTTTGGGAATAAGAAATCTATGCTGATACCCAATTGCTTGTTTCGAGTTGGGGGTTCTGCGGTCCTACTTTCCAACAAGTCTGCAGATAGAAGGAGGGCAAAGTACAGGCTTCTTCATATTGTAAGGACCCATCGTGGGGCTGATGATAAGGCTTTTCGATGCGTTTATCAAGAACAGGATGGCGCTGGAAAGACTGGTGTTTCCTTATCTAAAGATTTAATGGCAATAGCTGGAGGGGCACTTAAAACCAACATCACAACCCTTGGTCCTCTTGTGCTCCCTATCAGTGAGCAGCTTCTGTTTTTTGCTACTTTGGTGATGAAGAAATTGTTCAGGGCAGATGTAAAGCCTTACATACCAGATTTTAAGCTGGCATTTGACCATTTCTGCATACATGCTGGGGGCAGGGCAGTGATTGATGAGCTGGAGAAGAACCTGCAGTTGCTTCCAGTGCATGTAGAGGCTTCTCGGATGAGTCTTCACCGTTTTGGGAATACTTCATCAAGCTCCATTTGGTATGAATTGGCGTATACAGAAGCAAAAGGGAGAATCCGAAAGAGCAATCGTATCTGGCAAATTGCATTTGGAAGTGGTTTTAAATGTAATAGTGCAGTCTGGGAGGCACTACGGAATGTGCAGCCATCTCCTAATGGACCCTGGGAAGATTGCATTGACAAGTATCCAGTGAAAATAGTCACCTA 1547 0.4544 MDQGRATNVATPGGGAVGVQIQHSRRVLPDFLQSVNLKYVKLGYHYLISNLFTLCFIPLIFVTLIEVSQMDLEDLRQLWLHLQYNLVSIVICSAFLVFGLTVYITTRPRPVYLVDFSCYRPPDHLKAPFDRFMEHSRLTGDFDDSSLEFQRKILERSGLGEETYVPEAMHFIPPRPSMAAAREEAEQVMYGALDNLFLNTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIALDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSADRRRAKYRLLHIVRTHRGADDKAFRCVYQEQDGAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFATLVMKKLFRADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMSLHRFGNTSSSSIWYELAYTEAKGRIRKSNRIWQIAFGSGFKCNSAVWEALRNVQPSPNGPWEDCIDKYPVKIVT 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00820 515 CDD CHS_like 93 488 - -
Bva10g00820 515 PANTHER 3-KETOACYL-COA SYNTHASE 18 514 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva10g00820 515 SUPERFAMILY Thiolase-like 320 489 IPR016039 GO:0016746
Bva10g00820 515 Gene3D - 134 490 IPR016039 GO:0016746
Bva10g00820 515 PANTHER 3-KETOACYL-COA SYNTHASE 4 18 514 - -
Bva10g00820 515 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 408 489 IPR013747 -
Bva10g00820 515 PIRSF Very_long_ch_3-ktacl-CoA_syn 30 515 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva10g00820 515 Pfam FAE1/Type III polyketide synthase-like protein 103 392 IPR013601 GO:0006633|GO:0016020|GO:0016747
Bva10g00820 515 SUPERFAMILY Thiolase-like 97 315 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00820 Bva-Chr10 6428496 6431055 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00820 10 6428496 6431055 Bva10g00820 10 6428496 6431055 ECH