Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00817 ATGGAAATGCCGCGACTACTGCCCAAGACTGCTATAATCCTGCTCTTTGTTCAGTTTGCTCTAGCCCAGGTAATGCCCTTGAACTCTAGAATTGAATGGCTGGCGTTACTGGACCTTCGCTCATCGTTGGGAATCAGGCGCACGGACTGGCCCAGAAAGGCTGCGCCTTGTACGAACTGGACTGGGGTTCACTGCGAAAACGGTCGAGTAGTTGGCCTCAATGTATCCGGCTTAAGACGAACCCGTGCTGGGCGTCAGCAGCCTCGCTTCGCCGTGGATTCTCTTGCGAATTTCACTCTCTTGGCGTCATTTAATGCTTCTACGTTTTTTCTCAATGGGTCTATTCCTGATTGGTTTGGCTATCGCCTTGCTGCTCTCCAACGGCTCGATCTAAGTTCTTGCTCGATTACAGGTTTGATTCCCTCATCCCTTGGGAATTTGAGCAGATTGAATTATTTGTCTCTATCTGGTAATGATCTCACCGGTAAAACGCCTTCGACATTGGGACAGTTATTGGGGCTATCAGTGCTTGATCTCTCAGGGAATTCGCTGACTGGATCAGTACCTTCCTTTTTCTCGTCTCTTAGCAATCTTACCAGGCTTGAACTTGcttctaattatttatctgGGTCAATCCCAGCCAGTCTCGGCAACCTTCCTAGCCTCCAATTATTGAGTCTTTTTGACAATGGCCTCACGGCTTCAATTCCAGTTCAACTGGCTAATCTTTCACGGTTAGTTAAACTTGATCTTAGCAAGAATTCATTGTCCGGTTCATTGCCTCATAGTTTGTTTTCTAATCTTCTTGCCCTTCAAAATCTCTCTCTTGCTGACAATGATTTTGATGGTACTCTTCCTGCTACGCTATGGTCAGCGCCCAACTTGGTGTTTCTTGATGCATCCAGCAATAATCTTACTGGTCCCTTGCCACAACTTAATTCGAGTATTAATTCCACTCGTGTCTTATTTAACCTCTCAAACAATCAACTCTATGGATTCCTGAACACTTCGCTTAAGAAGCTTGGAAGAATTGATTTGTCCAGTAACTATTTCCAAGGTGAGGGGCACAGTGATGATTTAAGCAATGCATCTCTTGCTAACAATTGTCTAGAGATGGTTCCCAATCAGAGAAGTTTCCAAGACTGTAGACTGTTTTATGTTCAGAGAAACTTGAACTTCAGTAATGCAGGTGGGCAAGAACCAACTCCGTCGCCATTACCAGAATTTGATTCAAAAAACAACAAACGAGTGATATTCATACTTGTAGGTATATTTGGCGGACTTGGCTTTATTGTGCTTCTAGCATTGGTCCTCATACTGCTTCTAAGAAAACGCGATAAAAGCGTTGCAAGCCAAAGAGGGACAGCGAATGTGGGAAATGTTCCAGAAGGGGAAAATCCTAGACCTCCCAAGGATCCTTTCCTTTTAACTGGAATGGGAGAATCATTTACTTATGAGCAAATGCTCCAGTTGACTGGTAATTTTGCTGAAGCAAATATAATCAAACATGGTCATTCTGGAGACCTCTATCGGGGAATTTTGGAAGGTGGAGTAACAGTGGTAGTTAAGAAGGTAGATGTCAATTTAATTAGGAGAGAATCATACATGCTGGAACTGGAGCTATTTAGCAAAGTTTCACACACAAGATTGGTCCCGCTCCTCGGGCACTGCTGggaaaatgagaatgaaaaattCTTGATTTACAAGTATATGCCTAATGGTGACTTGGCTACTTCGTTCAATAGAGTCACTGGTACAGATGGTAAGTCACAGTCCCCAGATTGGATTACCAGATTGAAAATTGCAATTGGAGCTGCTGAAGCCCTGTCTTGCCTACACGAGTGCAGCCCTCCCCTTGTTCATAGAGATGTCCAAGCAAGCAGTATCCTACTTGAAGATAAGTTTGAAGTGCGCCTTGGAAGTTTAAGTGAGGTTACTGCCCAAGGAGATTTTCACCAGAGTGTCACCACAAAGTTCTTCCGCAAGCCGCACAGATCTTCTGATCAAGGCACTCCTGGTGGTTTATCATCCGTCGCTTGTTCATACGATGTCTACTGTTTTGGGAAGGTCTTACTTGAACTTGTTACCGGTAATCTTGGTGTCAGCAAATCAGAGGATGACAGCACAGGAGAATGGTTAAAGCAGACGCTGTCTTACGTTAGTCTATACGACAAAGAACTGGTGAATAATATTGTCGACCCATCTCTGATCGTAGATGAGGATTTGTTAGAAGAGGTGTGGGCAATGGCGATTGTGGCCAGATCATGCCTGAATACCAAGCCTTCTAAACGCCCCTCCATGAGACATGTCCTCAAAGCACTGGAAAATCCATTGAAGGTAGTACGACAAGAATATTCAAGCTCAGTGAGATTGAGAACAAATTCATCGAGGAGATCATGGAGCTCGGCTTTCTTTGGTAGCTGGAGACACAACTCATTAGAAAGTGCTACTGCTGGCCCGGGGCCCACAAGCAAGGAAATGCAACCAGGAAGAGTCGGTTCTCACGGTAGTGGTGGAAATGAACATTCATCTTCCAATAAAAAGTCATCAAGTGAAATTTACCCTGAACCATA 2573 0.4396 MEMPRLLPKTAIILLFVQFALAQVMPLNSRIEWLALLDLRSSLGIRRTDWPRKAAPCTNWTGVHCENGRVVGLNVSGLRRTRAGRQQPRFAVDSLANFTLLASFNASTFFLNGSIPDWFGYRLAALQRLDLSSCSITGLIPSSLGNLSRLNYLSLSGNDLTGKTPSTLGQLLGLSVLDLSGNSLTGSVPSFFSSLSNLTRLELASNYLSGSIPASLGNLPSLQLLSLFDNGLTASIPVQLANLSRLVKLDLSKNSLSGSLPHSLFSNLLALQNLSLADNDFDGTLPATLWSAPNLVFLDASSNNLTGPLPQLNSSINSTRVLFNLSNNQLYGFLNTSLKKLGRIDLSSNYFQGEGHSDDLSNASLANNCLEMVPNQRSFQDCRLFYVQRNLNFSNAGGQEPTPSPLPEFDSKNNKRVIFILVGIFGGLGFIVLLALVLILLLRKRDKSVASQRGTANVGNVPEGENPRPPKDPFLLTGMGESFTYEQMLQLTGNFAEANIIKHGHSGDLYRGILEGGVTVVVKKVDVNLIRRESYMLELELFSKVSHTRLVPLLGHCWENENEKFLIYKYMPNGDLATSFNRVTGTDGKSQSPDWITRLKIAIGAAEALSCLHECSPPLVHRDVQASSILLEDKFEVRLGSLSEVTAQGDFHQSVTTKFFRKPHRSSDQGTPGGLSSVACSYDVYCFGKVLLELVTGNLGVSKSEDDSTGEWLKQTLSYVSLYDKELVNNIVDPSLIVDEDLLEEVWAMAIVARSCLNTKPSKRPSMRHVLKALENPLKVVRQEYSSSVRLRTNSSRRSWSSAFFGSWRHNSLESATAGPGPTSKEMQPGRVGSHGSGGNEHSSSNKKSSSEIYPEP 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00817 857 ProSiteProfiles Protein kinase domain profile. 495 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00817 857 ProSiteProfiles cAMP/cGMP binding motif profile. 500 549 IPR000595 -
Bva10g00817 857 PANTHER RECEPTOR-LIKE PROTEIN 55 5 278 - -
Bva10g00817 857 Pfam Leucine rich repeat 174 232 IPR001611 GO:0005515
Bva10g00817 857 Pfam Leucine rich repeat 116 160 IPR001611 GO:0005515
Bva10g00817 857 Pfam Protein tyrosine and serine/threonine kinase 500 774 IPR001245 GO:0004672|GO:0006468
Bva10g00817 857 Gene3D Transferase(Phosphotransferase) domain 1 571 796 - -
Bva10g00817 857 PRINTS Leucine-rich repeat signature 174 187 - -
Bva10g00817 857 PRINTS Leucine-rich repeat signature 243 256 - -
Bva10g00817 857 MobiDBLite consensus disorder prediction 837 857 - -
Bva10g00817 857 MobiDBLite consensus disorder prediction 814 857 - -
Bva10g00817 857 Gene3D Phosphorylase Kinase; domain 1 473 570 - -
Bva10g00817 857 Gene3D Ribonuclease Inhibitor 192 415 IPR032675 -
Bva10g00817 857 SMART LRR_typ_2 147 170 IPR003591 -
Bva10g00817 857 SMART LRR_typ_2 171 194 IPR003591 -
Bva10g00817 857 SMART LRR_typ_2 268 292 IPR003591 -
Bva10g00817 857 SMART LRR_typ_2 243 267 IPR003591 -
Bva10g00817 857 SMART LRR_typ_2 195 219 IPR003591 -
Bva10g00817 857 SMART LRR_typ_2 123 146 IPR003591 -
Bva10g00817 857 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 5 278 - -
Bva10g00817 857 PANTHER RECEPTOR-LIKE PROTEIN 55 283 824 - -
Bva10g00817 857 Gene3D Ribonuclease Inhibitor 31 191 IPR032675 -
Bva10g00817 857 SUPERFAMILY L domain-like 51 353 - -
Bva10g00817 857 SUPERFAMILY Protein kinase-like (PK-like) 470 774 IPR011009 -
Bva10g00817 857 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 283 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00817 Bva-Chr10 6418867 6422853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Bva10g00817 PK_Tyr_Ser-Thr 2.3e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00817 10 6418867 6422853 Bva10g00817 10 6418867 6422853 ECH