Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00811 ATGGCTGAACGCACCAACTCCGATAACCGCCTCGAAATCTCTGTCGCACCCCCGTACCAGATCTCCAAAGATTTCCACAGCGCTGACAATCCTATTCCACTTTCGCCACAGTGGCTTCTTCCAAAGCCAGGGGAGAGCAAACCTGGAATAGGAACTGGGGAAAACCATGTGATCTCAAATCCACCATATGGTAATCGCTCAGAGACTGTCAAGACATCTGGAAATGGAGAGGATTTGCATGATTCTCATAAGAGAAAGGATGTCTTTAGGCCTTCTATGCTTGATGCAGAAAGTGGTCGCCGGGACCGTTGGCGTGATGAAGAGAGAGACACCAAGTCCTCCATTCGTAAGGATCGTTGGAAGGATGGGGACAAAGACTATGGTGATGCACGGAGAGCAGACCGATGGCCGGAAAACTTGTCCACAAGGCACTTTGGGGAAGCACGTCGTGGTACTTCTGATAGATGGAATGATTCAGGTAACAGGGAAACCAACCATGATCAGCGGCGTGAGAGTAAGTGGAATACACGCTGGGGTCCTGATGACAAGGAGTCTGAAGGTCTGCGTGAAAAATGGAGTGATTCTGGAAAAGACGGTGAAACACATGGATTGTCCCACAtttcaaatcatggaaagGATGAAAAGGAGGGGGATCATTATCGCCCATGGAGACCTAACTCCTCACAAAGCCGTGGAAGGGTAGATCCTCCCCACCAACAAAACTTAACACCAAACAAACAGGTCTCGACATTTTCTTACGGGCGGGGCCGTGGGGAGAATACACCTCCAACCTATACACTTGGACGTAGTCGGGTTGGAGCCGGTGGTAGCTCTATGAATAGCGTCTCTTCATATTCTCCATATTCTGGGCCTGCATTGGATAAAGTTGAAAGTGGCCATGGAGAGCCTGACCTGTTTAGATATAGCAGGATAAAATTGCTTGATGTGTACAGAGTGACTGATGCACTTATGAGTAGAAAATTAGCTGATGATTTTGTGCAGGTGCCTAATCTTACACAGGATCAGGCGTCAGAGCCTCTAGCATTCTGTTTGCCAAATTCTGAGGAActgGCTATCTTAAATGGCATTGAGAAGGGGGAAATAGTAAGCAGCAGTGTTCCTCAGGTGCCAAAAGATGGACGGAGCTCAACAGATTTTACACATGCAAGGCGAATGAAGATTGGAAGTGAACCATTTCAAGATAGAGGTGAAGATGGGGGTACTTACAGAACAGGTGATGAGGTGCTCATTAGAAGAGAATCAACTCTTGAGGGAGACAGTTCCGTTCATCCTGGTGCTGCGTGGCGAGCCACAGCAACTGAACATTCAAACTCTCTTCTGCAAGATGGTAGAGAGATGCTTCATGATACAAGGTCAAGAAACTTAGATGTTGGCTGGTCACATCACTCAAAAGATCCTCATAATCAGTGGGAAAATAGTTTGGGTTTTTCATCAGATGCCAAAGATGTTGCTAAGTGGCAAACTAGTGACAATCCTGTTGTTAAGAGGCAGCCACCTGGCATCATGGACAGTGAATTTGAAACCAGGAGAGTTCCACAGATGTCTCCTGAGGAGTTATCTCTTTTCTATAAAGACCCCCAGGGTCAAATTCAGGGCCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGATATTTTGGCATTGATTTACCTGTCCGGGTGGAAAATGCAGCACCTGACTTGCCATGGTTGTCTCTTGGTGATGCAATGCCCCATTTACGTGCCAAGGCCCGACCACCGCCTGGGTTTTCTGCACCAAAACCGAATGACTTTACAGATGCATCTGCTCGGCAAACATCCAGCACCTTCGGAAGTGTTCATGGTGGCTTGAGTGAGATGGAGATTATGAGAAATGATCCCAGGCTTAGACAGAGTTCTAATACTGAAGCTGAAAATAGGTTTTTGGAGTCACTAATGTCTGGTAATAAGAGCAGCCCTCCACTTGATAGTTGGACATTATCAGAAGGTTTGCAAGGATTCATTGGAAATAATGCTGCCAATCTGGGTCCATCAGGAGTAGATAGTGGAAATAACCTGTATTTGCTGGCCAAGAAAATGGCAATTGAAAGACAGAGATCCTTACCCAATCCTAATCCTTACTGGCCAGGAAGAGATGCAGCATCACTAGTGTCAAAATCAGATATTGCCCCAGATGCACCAGTGCATTCAAAACTCTTGTCTTCTGTGAGTGACAATTCACGTCAGCCTCAGTCCCAAAATGCTGACTTGTTGTCAATTATTCAAGGATTATCGGACAGGTCTTCGGGGGGTTTAAATAATGGTGTTGCTGGCTGGCCAAATTACCCTGTACAAAGTAGTTTGGATGCCCTTTCGAATAAGATTGACTTACATCATGATCAGAATTTTCCTCAAGTGCCATTTGGAATTCAACCTCAAAGGCTGCAAGCACAAAATCAATTGTCTTTAAGCAATTTAGTAGCTCAATCTGTAGATAATCCATCTGGTATTTTAACAGCAGATAAGTTGCTCTCTTCTGGCTTACCCCAAGACCCACAGATGTTGAACATGTTGCAACAGCAATACTTGCTGCAGTTGCATTCTCAGGCCGCTGCTCCGGCCCAGCAGATGTCATTATTGGATAAGTTTTTGTTACTGAAGCAGAAGCAGGAggagcagcagcagcagcagttACTACGGcaacaacagcagcaacaACTGATATCTCAGGTGCTGCAGGAGCATCAGTCTCACCAGCGTTTTGGTGAATCATCTTATGGACAGTTGCAGGGAGGTGGAATACCAATTGGGAATTTACGAGTTGATCCGTCTCCACTTCAACCATCACATGAGACTTTTCCTATCAGCTCACAGACTCCAATTTCTAGTTTGCAAGATGAGCTTATTACTAATTTGAGTTTACCTTCACAAGTTACTGAAGAAACTAGTCATAATGTAAGCAGTGAAGCTTCTGTACATCTGCCACACCAATTGTTTAGCAGTATAAGTTATCAGAAAAGTTGGGGCCCTTCTATTCCggaacaaattaataaaatgcatCAGGACTCCTTTCCTACATCAACATATGTTGAAAGTTCTGTATCGTGTGAGGAGAACAGATCCAAAGAGGAACTCTTACAGAAATCACTTTCTGCTTCTGACTATACTCCTAAATCTGCGGAGCAGATGCCAGATGACAGAACTGATGATATTGCCATGGCTTCAACATCCAAGTCCACTGAGCTTTCTGCATCTGTGCCTCATGTTGTGCCTGGTGTTTCGGTGTTGTCTGCTGCATCTTGTGGGACTGAGTTACCTGCAGCAACTGATCTAGATAGTGATGTGAAGCTTCTTTCTGATAATGCAATTGAAGAGACGCAGGTTGGAGGGGAAAAGGCTATTGCTGAGCTCTCTATGTCTGATGTAAAAGGTGTTGAACTACGTGAACCCAAAAAGGCTTCTGAGAAGAAATCTAAGAAGCAAAAATCTTCCAAATCTCAGTCTTCTGATCAGGCAAAGGGGTTGCAGAAGAATCTGCCTTTGCAGCAGTCAAAGCAATCAGAAGCTGAAAATCTAAGCGTTAGTGACATGAAGTTGGTGGAGGACAACCAATTGAGAACTGCTACCAAAGAGGTTACTGATAATCAAGAACTTAATGGTCTGCCTTCTATTGTTCCTGGAAGCTTTACTGAACGTGTTCTTGAGGGTGACTTGAATAATGTAAGTTCTGTTACTACACAGAGTACTGAATTGCATGCAGGGCAACGAGCTTGGAAACCCGCTCCTGGTTTCAAGGCAAAGTCTTTATTGGAAATTCAACaggaagaacaaagaaaggcTCAGACAGAAATGCTTGTAACTGAGATTGCTACTTCTGTCAACTCTCTGAGTCTTTCTACTCCTTGGGCTGGGGTTGTGGCCAATCCAGATTCTGTGAGGGTATCTACTGAAACTCAAAGAGAATTAGGGAATACTGAAAATATGGGTAGGTCTGAAACTTCCCGACATTCAAAGAGCAAGAAAAGCCAATTACATGATCTATTGGCTGAAGAAGTTTTGAAGAAATCTAGTGAAAGAGATGCTGAAGTTCCAGACAGCATGTCATCCTCCCAAAATACAGGGGTCCATTCAGAATCCATAGATGATGACAATTTTATTGAGGCTAAAGACACCAAACGAAGCCGAAAAAAGTCAACAAAATCAAAGGGTTCTGCGGCTAAGGTCTCAATGTCTACCAGCTCTAGTGATATGCCAACTGCTTCAAGTCCCCTTGAAAAGAGCAAGAGTTTCCGCCTTGTGCAGCAGGAGAAAGAAGTATTGCCTGCCATTCCTGCAGGACCCTCTCTTGGAGATTTTGTTCTATGGAAAGGAGAGTCAGCTAGTCCATCTCCTTCTGTAGCATGGTCTACGGAATCTGGTAGAGTGGCTAAACCAGCTTCATTAAGGGACATTCTAAAGGAGGAGGAGAAAAAGGGTTCTGGAATACAGGGAAACCAAGTGCCGACTCCTTTGAAATCACAGCCTTCCCTTGCAGCTCGAACAACTGCTCCGTCATGGTCTACGTCTGCATCCTCTCCATCTAAAGCTGCATCTCCAATGCAGATAAATTCCCATGCTGCGtcccaatcaaaatataaagcaGATGATGATTTGTTCTGGGGTCCAATTGAGCAATCTAAGCAAGAAACTAAGCAGTCGGATTTCCCTCAGCTTGCAAGCCAGGGGAGCTGGGGGTCTAAAAATGTTCTCGCGAAAGGTAATTCACCTGGACAATTAACTCGTCAAAAATCAGCGAGTGGGAGGCCAACTGAGAAGTCTGTATCATCACCACCTGCCTCTTCCCAATCCTtgctaaaattgaaaaaggatGCAATGACTAAGCATTCTGAAGCCATGTACTTCAGAGATTGGTGCGAAAATGAGTGTGTTAGGCTTATTGGGACAAAAGCAGATACTAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCAGAAGCTGAAACGCTTTTGATAGAAAATCTTGGACAATATGACCCTGATCATGAGTTCATCGATAAATTCCTCAACTACAAAGAATTATTGCCATCAGATGTCCTTGAAATAGCTTTTCAAGGCCGGAATGATAAAAAGGTTCCCGGATTTAGTGCTGGAGACATGAATTTTGGAAATGCAGAGGATCTGGACTACAATGTTGGCACTGAAGGATCCTCAAAAGGGGGAGGAAAGAAGAAGGGTAAGAAGGGGAAGAAGGTTAACCCGTCAGTTTTGGGATTTAATGTCGTAAGTAACCGGATCATGATGGGTGAGATCCAGACCGTAGAAGATTA 5312 0.4341 MAERTNSDNRLEISVAPPYQISKDFHSADNPIPLSPQWLLPKPGESKPGIGTGENHVISNPPYGNRSETVKTSGNGEDLHDSHKRKDVFRPSMLDAESGRRDRWRDEERDTKSSIRKDRWKDGDKDYGDARRADRWPENLSTRHFGEARRGTSDRWNDSGNRETNHDQRRESKWNTRWGPDDKESEGLREKWSDSGKDGETHGLSHISNHGKDEKEGDHYRPWRPNSSQSRGRVDPPHQQNLTPNKQVSTFSYGRGRGENTPPTYTLGRSRVGAGGSSMNSVSSYSPYSGPALDKVESGHGEPDLFRYSRIKLLDVYRVTDALMSRKLADDFVQVPNLTQDQASEPLAFCLPNSEELAILNGIEKGEIVSSSVPQVPKDGRSSTDFTHARRMKIGSEPFQDRGEDGGTYRTGDEVLIRRESTLEGDSSVHPGAAWRATATEHSNSLLQDGREMLHDTRSRNLDVGWSHHSKDPHNQWENSLGFSSDAKDVAKWQTSDNPVVKRQPPGIMDSEFETRRVPQMSPEELSLFYKDPQGQIQGPFKGIDIIGWFEAGYFGIDLPVRVENAAPDLPWLSLGDAMPHLRAKARPPPGFSAPKPNDFTDASARQTSSTFGSVHGGLSEMEIMRNDPRLRQSSNTEAENRFLESLMSGNKSSPPLDSWTLSEGLQGFIGNNAANLGPSGVDSGNNLYLLAKKMAIERQRSLPNPNPYWPGRDAASLVSKSDIAPDAPVHSKLLSSVSDNSRQPQSQNADLLSIIQGLSDRSSGGLNNGVAGWPNYPVQSSLDALSNKIDLHHDQNFPQVPFGIQPQRLQAQNQLSLSNLVAQSVDNPSGILTADKLLSSGLPQDPQMLNMLQQQYLLQLHSQAAAPAQQMSLLDKFLLLKQKQEEQQQQQLLRQQQQQQLISQVLQEHQSHQRFGESSYGQLQGGGIPIGNLRVDPSPLQPSHETFPISSQTPISSLQDELITNLSLPSQVTEETSHNVSSEASVHLPHQLFSSISYQKSWGPSIPEQINKMHQDSFPTSTYVESSVSCEENRSKEELLQKSLSASDYTPKSAEQMPDDRTDDIAMASTSKSTELSASVPHVVPGVSVLSAASCGTELPAATDLDSDVKLLSDNAIEETQVGGEKAIAELSMSDVKGVELREPKKASEKKSKKQKSSKSQSSDQAKGLQKNLPLQQSKQSEAENLSVSDMKLVEDNQLRTATKEVTDNQELNGLPSIVPGSFTERVLEGDLNNVSSVTTQSTELHAGQRAWKPAPGFKAKSLLEIQQEEQRKAQTEMLVTEIATSVNSLSLSTPWAGVVANPDSVRVSTETQRELGNTENMGRSETSRHSKSKKSQLHDLLAEEVLKKSSERDAEVPDSMSSSQNTGVHSESIDDDNFIEAKDTKRSRKKSTKSKGSAAKVSMSTSSSDMPTASSPLEKSKSFRLVQQEKEVLPAIPAGPSLGDFVLWKGESASPSPSVAWSTESGRVAKPASLRDILKEEEKKGSGIQGNQVPTPLKSQPSLAARTTAPSWSTSASSPSKAASPMQINSHAASQSKYKADDDLFWGPIEQSKQETKQSDFPQLASQGSWGSKNVLAKGNSPGQLTRQKSASGRPTEKSVSSPPASSQSLLKLKKDAMTKHSEAMYFRDWCENECVRLIGTKDTSFLEFCLKQSRSEAETLLIENLGQYDPDHEFIDKFLNYKELLPSDVLEIAFQGRNDKKVPGFSAGDMNFGNAEDLDYNVGTEGSSKGGGKKKGKKGKKVNPSVLGFNVVSNRIMMGEIQTVED 1769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00811 1769 ProSiteProfiles GYF domain profile. 525 576 IPR003169 GO:0005515
Bva10g00811 1769 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1769 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 22 296 - -
Bva10g00811 1769 Pfam GYF domain 529 565 IPR003169 GO:0005515
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1555 1613 - -
Bva10g00811 1769 Coils Coil 880 901 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1030 1063 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1140 1192 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1306 1325 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 223 288 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1358 1374 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1305 1424 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 73 222 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1375 1389 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1326 1357 - -
Bva10g00811 1769 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1769 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1398 1424 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 58 72 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1490 1537 - -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1726 1745 - -
Bva10g00811 1769 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 57 63 IPR002052 GO:0003676|GO:0008168|GO:0032259
Bva10g00811 1769 Gene3D - 513 592 IPR035445 -
Bva10g00811 1769 SMART gyf_5 526 581 IPR003169 GO:0005515
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1449 1537 - -
Bva10g00811 1769 SUPERFAMILY GYF domain 517 582 IPR035445 -
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1140 1161 - -
Bva10g00811 1769 CDD GYF 525 582 IPR003169 GO:0005515
Bva10g00811 1769 MobiDBLite consensus disorder prediction 1162 1192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00811 Bva-Chr10 6385246 6393210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00811 10 6385246 6393210 Bva06g02009 06 13462195 13471131 BWGD
Bva10g00811 10 6385246 6393210 Bva10g00811 10 6385246 6393210 ECH