Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00791 ATGGTTCGGTGTAGTTTATGCACGCTCTCCAGATTTCATTGTAAGCTTCGATTCACGGTCGTTGTTTTCGAGATTGTATTGATATTGGCATGGTTAGAAGCCGCCAATGCAAAACTCCAAGAACACCAACTGCAATGGGGTGGCCTGGAAAGGAGAAGTGAGAACATTGCCTCACACTCTTGTATACATGACCAGATACTGGAACAGAGAAAGCGACCTGGTCGCAAGGTGTATTCGGTTACCCCACAGGTTTATGGTCCTGGTCTGTCAAAACCCCTTCAACATAAAGGCAGGTCATTACTTGGATTGTCAACATTGTCAGGGCGTCTAAAGGATGCAAAGCAACCTATTaggatatatttaaattatgatgCCGTTGGTCACTCCCCTGATAGAGATTGTCGTAAAATTGGTGATATTGTCAAACTTGGAGAGCTCCCCATGTCTTCTCTTCCGGGTTTCCCCTTTTGTAATCCTCATGGTGATCCTCCTATCTTTGGTGATTGTTGGTATAACTGTACTTCAGAAGATATCTCAGGAGAGGACAAAAAACGTCGGCTTCGCAAGGCCTTGGGTCAGACAGCTGATTGGTTTAGAAGAGCATTAGCTGTTGAGCCAGTCAAGGGGAATTTGCAATTGAGTGGATATTCTGCATGTGGGCAAGATGGTGGCGTGCAGCTCCCTCGTAAATATGTTGAGGAGGGTGTCTCTGATGCCGACTTAGTACTTTTGGTGACTACAAGACCTACAACTGGGAACACTCTTGCTTGGGCTGTGGCATGTGAACGGGATCAGTGGGGCCGTGCAATAGCTGGACATGTAAATGTTGCTCCTCGACATTTGACAGCTGAGGCTGAGACCTTACTTTCAGCCACTCTTATACATGAGGTTATGCACGTTCTTGGTTTTGATCCCCATGCCTTTTCTCATTTTAGAGATGAAAGGAAAAGGCGGCGAAATCAGGTTACTGAACAAGTCATGGATGAAAAGCTTGGGCGGATGGTGACCCGTGTAGTGCTTCCACGGGTTATCATGCATTCACGATATCATTATGGGGCATTCTCAGAAAACTTTACTGGTTTAGAGCTGGAAGATGGGGGAGGGCGTGGCACATCagGATCTCACTGGGAGAAAAGGCTTCTGATGAATGAGATTATGACTGGATCTGTGGATACCAGATCTGTAGTTTCAAAAATGACATTGGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGTATGGCAGACCATCTTGATTGGGGTCGCAACCAAGGTGTTGAATTCGTTACGTCCCCCTGCAATCTCTGGAAGGGGGCCTACCGTTGCAACACAACACAGTTGTCTGGTTGTACATATAACAGGGAGGCAGAGGGATATTGCCCGATTGTAACATACAGTGGAGACCTCCCTCAGTGGGCTCGATATTTTCCACAAGCTAACAAAGGTGGACAATCCTCATTGGCAGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACAAACAGTGCACGAGCACCTGATAGAATGCTGGGAGAAGTCCGTGGGAGTAACTCTAGGTGTATGGCCTCATCACTAGTACGGACAGGATTTGTTAGAGGTTCTATGACACAGGGAAATGGTTGTTATCAGCACAGGtgtataaataattctttagAGGTTGCAGTGGATGGTATCTGGAAAGTTTGTTCCCGTGCTGGTGGACCCATTCAGTTCCCTGGCTTTAAtgGTGAATTGATCTGCCCTGCATATCACGAACTCTGTAGGACAGTTCCAGTTGTTTTATCTGGGCAATGCCCCAATGCTTGTAATTTCAATGGTGATTGTGTTGATGGAAGGTGCCACTGCTTTCTAGGATTTCATGGTCATGATTGCAGTAGACGCTTCTGCCCCAGCAACTGCAATGGCAATGGCAAGTGCCTCTCCAATGGGATATGTGAATGTAAAAGTGGGTATACAGGCATTGACTGTTCCACCGCTGTCTGCGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTACGCTGGATACACATGCCAGAACAGCTCCACGCATCTCTCCAGTCTTTCTGTTTGCAAAAATGTACTGGGAAATGACATGTCTGGACAACATTGTGCACCCAGCGAACCAAGTATACTGCAGCAGCTAGAAGAAGTGGTTGTGATGCCTAATTACCACCGGTTATTCCCTGGTGGtgctagaaaattatttaacatatttggCAGCTCATATTGTGACGAGGCTGCTAAGCGATTAGCCTGTTGGATCTCGATCCAGAAGTGTGACAAGGATGGTGACAACAGGCTTCGAGTGTGCCATTCGGCTTGTCAGTCATATAATCTTGCATGTGGAGCTTCACTTGACTGCTCAGACCAAACCCTATTTAGCAGCGAGGGGGAAGGTCAGGGTCAATGCACTGGCTCCGGTGAGATTAAACTGTCATGGTTTAATCGCTTGCGAAGCAGTTTCTCAATTAGAAATAGTTCATTGAAAGGAATCTCTGTAAGATATAGGCAGCTTTA 2573 0.452 MVRCSLCTLSRFHCKLRFTVVVFEIVLILAWLEAANAKLQEHQLQWGGLERRSENIASHSCIHDQILEQRKRPGRKVYSVTPQVYGPGLSKPLQHKGRSLLGLSTLSGRLKDAKQPIRIYLNYDAVGHSPDRDCRKIGDIVKLGELPMSSLPGFPFCNPHGDPPIFGDCWYNCTSEDISGEDKKRRLRKALGQTADWFRRALAVEPVKGNLQLSGYSACGQDGGVQLPRKYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFSHFRDERKRRRNQVTEQVMDEKLGRMVTRVVLPRVIMHSRYHYGAFSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADHLDWGRNQGVEFVTSPCNLWKGAYRCNTTQLSGCTYNREAEGYCPIVTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCSRAGGPIQFPGFNGELICPAYHELCRTVPVVLSGQCPNACNFNGDCVDGRCHCFLGFHGHDCSRRFCPSNCNGNGKCLSNGICECKSGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSTHLSSLSVCKNVLGNDMSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSEGEGQGQCTGSGEIKLSWFNRLRSSFSIRNSSLKGISVRYRQL 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00791 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 398 427 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bva10g00791 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 245 274 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bva10g00791 857 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 113 597 - -
Bva10g00791 857 Pfam EGF-like domain 636 663 IPR013111 -
Bva10g00791 857 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 2 829 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bva10g00791 857 Gene3D Laminin 635 666 - -
Bva10g00791 857 Gene3D Laminin 604 633 - -
Bva10g00791 857 ProSitePatterns EGF-like domain signature 1. 652 663 IPR000742 -
Bva10g00791 857 ProSitePatterns EGF-like domain signature 2. 652 663 IPR000742 -
Bva10g00791 857 Gene3D Leishmanolysin domain 3 438 497 - -
Bva10g00791 857 ProSiteProfiles EGF-like domain profile. 632 664 IPR000742 -
Bva10g00791 857 Pfam Leishmanolysin 171 595 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bva10g00791 857 Gene3D Leishmanolysin , domain 2 309 435 - -
Bva10g00791 857 Gene3D - 111 300 - -
Bva10g00791 857 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 2 829 - -
Bva10g00791 857 Gene3D Leishmanolysin domain 4 499 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00791 Bva-Chr10 6289408 6296569 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00791 10 6289408 6296569 Bva06g02026 06 13546540 13553695 BWGD
Bva10g00791 10 6289408 6296569 Bva10g00791 10 6289408 6296569 ECH