Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00790 ATGCCCATGGCCATTACATCAGACTTCTCTCTCCTCCTTCTCCTTGTTCTCGTCTCAGGTAATGTGGCTTCGGCCGCCGTGTTCACACTGGAAAACCGTTGTAGTTATACGGTATGGCCCGGAACACTCTCCGGCAACGGTGTTGCAATCGTCGGTGACGCTGGATTGTCCTTGCAACCCGGATCGTCAGTTCAGCTCACCGCTCCACCAGGTTGGTCGGGCCGGTTTTGGGGCCGAACCGACTGCAACTTCGATAATGCCGGTAAGGGAAAATGTGTTACCGGGGATTGTGGCGGGCTAAAATGCATTGCAGGAGGAGCTCCGCCGGTGACGCTGGTCGAGTTCACCATTGGAAGCGCCAGTAATACCAAGGATTTCTATGACGTCAGCCTCGTCGACGGTTACAATGTGGGGATGGGTGTGAAGGCAACCGGAGGAAGCGGTGATTGCCAGTACGCGGGGTGTGTTGCGGACTTGAACAGTCACTGCCCGAGGGAGTTGCAGGTAATGAACGGGGATTCGGTGGTGGCGTGCAAGAGCGCATGTGCGGCGTTTAACACGGCGGAGTTCTGCTGCACTGCTGATCACTCAACTCCACAAACTTGTTCGCCGACGCAGTACTCGGAGATGTTCAAGAACGCGTGCCCCACTGCCTACAGCTACGCATACGACGACGCTTCAAGCACTTGCACATGTTCTGGCTCTGACTACCTTATCACATTTTGTCCAACGCCATTCtcatg 743 0.5505 MPMAITSDFSLLLLLVLVSGNVASAAVFTLENRCSYTVWPGTLSGNGVAIVGDAGLSLQPGSSVQLTAPPGWSGRFWGRTDCNFDNAGKGKCVTGDCGGLKCIAGGAPPVTLVEFTIGSASNTKDFYDVSLVDGYNVGMGVKATGGSGDCQYAGCVADLNSHCPRELQVMNGDSVVACKSACAAFNTAEFCCTADHSTPQTCSPTQYSEMFKNACPTAYSYAYDDASSTCTCSGSDYLITFCPTPFS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00790 247 ProSiteProfiles Thaumatin family profile. 25 243 IPR001938 -
Bva10g00790 247 PANTHER OS03G0233200 PROTEIN 22 243 IPR001938 -
Bva10g00790 247 SUPERFAMILY Osmotin, thaumatin-like protein 26 243 IPR037176 -
Bva10g00790 247 Gene3D Thaumatin 26 243 IPR037176 -
Bva10g00790 247 CDD TLP-PA 27 242 - -
Bva10g00790 247 Pfam Thaumatin family 32 243 IPR001938 -
Bva10g00790 247 ProSitePatterns Thaumatin family signature. 88 102 IPR017949 -
Bva10g00790 247 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Bva10g00790 247 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Bva10g00790 247 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Bva10g00790 247 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Bva10g00790 247 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Bva10g00790 247 SMART tha2 28 243 IPR001938 -
Bva10g00790 247 PIRSF PR5 2 246 IPR001938 -
Bva10g00790 247 PANTHER PATHOGENESIS-RELATED PROTEIN 5 22 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00790 Bva-Chr10 6287060 6288546 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00790 10 6287060 6288546 Bva10g00790 10 6287060 6288546 ECH