Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00780 ATGGCCGCAGACACTCCACTGCTGAATAACAACCGTTCTAACGTTGAGGCGGAAGAAGCTGCGAGCTTCCCTGTTCGATTCGGTTTGGAGTCGAAGAGGCTATGGCACCTTGCTGGTCCAGCAATCTTCACTACCATATGTCAGTACTCACTTGGTGCACTCACTCAGACTTTTGCTGGTCTACACAGTGAGCTTGATCTTGCTGCCGTTTCTGTTGAAAACTCTGTCATCGCTGGCCTAGCTTTTGGTGTTATGTTGGGTATGGGGAGTGCTTTGGAGACTCTTTGTGGGCAAGCATACGGTGGGGGTCAGATCAGGACGTTGGGTGTGTACATGCAAAGGTCGTGGATCATCTTGTTGACTACGGCCCTTGTTTTGGTTCCTATATATGTTTGGTCACCTCCCATCTTGGAGCTTATTGGAGAGACCACGGAGATCTCAGATGCTGCTGGGAAATTTGCTCTGTGGATGCTTCCACAGTTGTTTGCGTATGCGATGAATTTTCCAATCCAGAAATTCTTACAGTCACAGAGGAAAGTTTTGGTCATGGCCTGGATTTCAGCAGTTGTATTGGTGCTACATGCGGTTTTTAGCTGGTTACTAATATTGAAGCTAGGTTGGGGCTTAACAGGAGCAGCAATCACCCTCAATTCGTCGTGGTGGCTGATTGTCATTGCCCAattgttttacattttcatcACTGGCTCCGACGGTGCTTGGAATGGCTTCACATGGCTGGCCTTTGCAGACCTGTTTGGTTTCGTCAAGCTTTCTTTGGCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTACTTGATGATTCTGATTGTGATAACAGGACGTCTGAAGCACCCTCTCATTCCAGTTGATGCAATCTCTATCTGCATGAACTTAAATGGCTGGGATACCATGATTGCATTGGGGTTCAATGCTGCAATAAGTGTTAGAGTGTCGAATGAACTTGGAGCTGGAAATTTCAATGCTGCCAAGTTTTCTGTGTTGGTAGTCTCTGTAACATCTGTATCCATTGGGGTTCTTATCATGATCCTAGTAGTTGCAACGAGGGATTACTTTCCTTATCTGTTTACCACAAGCGATGCAGTTGCAGCGGAAACAACAAAACTGGCTTCAATTCTTGCTGTCACTGTACTTCTAAACAGCCTTCAACCCGTCTTATCTGGTGTTGCTGTTGGAGCCGGGTGGCAAGCTCTTGTGGCATACATCAACATTGCGTGCTATTATCTTGTTGGGTTACCGGCAGGGATAATCTTGGGATTCACATTACATTTGGGAGCTGAGGGCATTTGGGGAGGGATGATCGGAGGCATAATTCTGCAGACTTCCATTCTTGTCGTGATTACTTCCATAACCAACTGGAAAAGAGaaGCTGAACAAGCAGAGAGTCGCGTAATGAATTGGGGTGGatcaataatcaatttctA 1442 0.4549 MAADTPLLNNNRSNVEAEEAASFPVRFGLESKRLWHLAGPAIFTTICQYSLGALTQTFAGLHSELDLAAVSVENSVIAGLAFGVMLGMGSALETLCGQAYGGGQIRTLGVYMQRSWIILLTTALVLVPIYVWSPPILELIGETTEISDAAGKFALWMLPQLFAYAMNFPIQKFLQSQRKVLVMAWISAVVLVLHAVFSWLLILKLGWGLTGAAITLNSSWWLIVIAQLFYIFITGSDGAWNGFTWLAFADLFGFVKLSLASAVMLCLEFWYLMILIVITGRLKHPLIPVDAISICMNLNGWDTMIALGFNAAISVRVSNELGAGNFNAAKFSVLVVSVTSVSIGVLIMILVVATRDYFPYLFTTSDAVAAETTKLASILAVTVLLNSLQPVLSGVAVGAGWQALVAYINIACYYLVGLPAGIILGFTLHLGAEGIWGGMIGGIILQTSILVVITSITNWKREAEQAESRVMNWGGSIINF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00780 480 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 466 - -
Bva10g00780 480 TIGRFAM matE: MATE efflux family protein 40 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva10g00780 480 CDD MATE_eukaryotic 30 465 IPR045069 GO:0042910|GO:1990961
Bva10g00780 480 Pfam MatE 40 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva10g00780 480 Pfam MatE 261 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva10g00780 480 PANTHER PROTEIN DETOXIFICATION 33 17 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00780 Bva-Chr10 6244378 6246987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00780 10 6244378 6246987 Bva10g00780 10 6244378 6246987 ECH