Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00773 ATGAGAGACCAAGGAATGGGAGCCGTGTTTGGTGAGGCCACCAACACCATCCCACGTCCCAAATACGCCAACGCCATGCAATTTTCCGATCCCAATCTCTCGTTGACCGCCGCAGGAGGGGTGGACGATGATTACTGCATGCGTAATAGCAGCGCGTCGATGATGAGCCCCGGGTCCTTCGACCCCATCCGTACGAGCGCGGAGGGATCACCCATGATGATGTCCCCATGGAATCAGACAGCCAATTCTCCCTTCTTCAAGTCACAGTGGTCTCAATGCGAAGACAACCTTCCGCAGAACGGTCTCATCGGCTCTCTCGTTCGCGAAGAAGGCCATATCTATTCCTTGGCCGCCACCGGCGATCTCTTGTACACTGGCTCCGACAGCAAGAACATCCGCGTTTGGAAGAACCTCCAAGAGTACTGCGGCTTCAAATCGAACAGTGGTTTGGTGAAAGCTATCATAATTTCCggtaacaaaattttcaccGGACACCAGGACGGTAAAATCCGAGTGTGGAAAGTGTCTCCCAAGAACCCTAGCGTTCATAAGCGTGCAGGTACGTTGCCCACCTTGAAAGATATTTTCAAGAGTTCTATCAAACCTAGCAATTACGTCGAGGTTAGACGACATCGTACGGCACTCTGGATTAAACACTCCGATGCCGTTTCTTGCTTGTGCTTGACGAGCGACAAAATGCATTTGTATTCAGCCTCCTGGGACCGAACCATAAAGTTCTGGAGGATCTCTGATTCCAAGTGTCTGGAATCTATACGCGCTCACGATGACGCCGTCAACTCCGTAGTGTGCGGGTTGGACGGATTGGTCTTCTCGGGATCGGCGGACGGAACCGTCAAGGTATGGCGGAAAGAGACGCAAGGAAAGGGGACGAAGCACGCGGCGGTTCAGACGCTGTTAAAACAAGAGAGTGCCGTTACAGCACTAGCAGTGAACGTGTCCGGCTCCTTTGTATACTGTGGATCTTCTGATGGTATGGTTAATTTCTGGGAAGGCGAGAAGCAATACGCTCACGGTGGGATCCTCAAGGGGCACAAGCTAGCAGTGTTGTGCATGCAAACCGCTGGCAATTTGGTGTTCAGTGGGTCCGCAGATAAAACGATATGCGCCTGGAGAAGAGATGGGGTCATCCACACGTGCCTCTCGGTTCTAACGGGTCATGATGGGCCGGTCAAGTGTTTGGCGGCGGAGGAGGACCGTGAATCAGCTTCCAGAGGAGATCAACGGTGGATTTTGTACAGTGGCAGCCTCGATAAATCAGTTAAGGTATGGGGCGTATCAGAGACGGCGGCTGATTTGAATCAGATGGCTATGATGCAACAGCAACAACAAATCTCTGCTTCTGATGTGGATTCCATACCATCAGACAACAGCTTCTCTTCCGGCCGAGCTAGCCAAAAGAGGAGATACTG 1430 0.5154 MRDQGMGAVFGEATNTIPRPKYANAMQFSDPNLSLTAAGGVDDDYCMRNSSASMMSPGSFDPIRTSAEGSPMMMSPWNQTANSPFFKSQWSQCEDNLPQNGLIGSLVREEGHIYSLAATGDLLYTGSDSKNIRVWKNLQEYCGFKSNSGLVKAIIISGNKIFTGHQDGKIRVWKVSPKNPSVHKRAGTLPTLKDIFKSSIKPSNYVEVRRHRTALWIKHSDAVSCLCLTSDKMHLYSASWDRTIKFWRISDSKCLESIRAHDDAVNSVVCGLDGLVFSGSADGTVKVWRKETQGKGTKHAAVQTLLKQESAVTALAVNVSGSFVYCGSSDGMVNFWEGEKQYAHGGILKGHKLAVLCMQTAGNLVFSGSADKTICAWRRDGVIHTCLSVLTGHDGPVKCLAAEEDRESASRGDQRWILYSGSLDKSVKVWGVSETAADLNQMAMMQQQQQISASDVDSIPSDNSFSSGRASQKRRY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00773 476 SUPERFAMILY WD40 repeat-like 105 438 IPR036322 GO:0005515
Bva10g00773 476 MobiDBLite consensus disorder prediction 450 476 - -
Bva10g00773 476 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 258 288 - -
Bva10g00773 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 216 257 IPR001680 GO:0005515
Bva10g00773 476 Gene3D - 211 275 IPR015943 GO:0005515
Bva10g00773 476 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 16 458 IPR045182 -
Bva10g00773 476 Pfam WD domain, G-beta repeat 110 136 IPR001680 GO:0005515
Bva10g00773 476 Pfam WD domain, G-beta repeat 253 288 IPR001680 GO:0005515
Bva10g00773 476 Pfam WD domain, G-beta repeat 346 377 IPR001680 GO:0005515
Bva10g00773 476 Pfam WD domain, G-beta repeat 219 247 IPR001680 GO:0005515
Bva10g00773 476 Pfam WD domain, G-beta repeat 139 174 IPR001680 GO:0005515
Bva10g00773 476 Pfam WD domain, G-beta repeat 310 336 IPR001680 GO:0005515
Bva10g00773 476 Pfam WD domain, G-beta repeat 385 430 IPR001680 GO:0005515
Bva10g00773 476 Gene3D - 276 475 IPR015943 GO:0005515
Bva10g00773 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 305 337 IPR001680 GO:0005515
Bva10g00773 476 CDD WD40 110 430 - -
Bva10g00773 476 Gene3D - 24 210 IPR015943 GO:0005515
Bva10g00773 476 ProSiteProfiles Trp-Asp (WD) repeats profile. 258 288 IPR001680 GO:0005515
Bva10g00773 476 SMART WD40_4 298 337 IPR001680 GO:0005515
Bva10g00773 476 SMART WD40_4 341 378 IPR001680 GO:0005515
Bva10g00773 476 SMART WD40_4 137 174 IPR001680 GO:0005515
Bva10g00773 476 SMART WD40_4 251 289 IPR001680 GO:0005515
Bva10g00773 476 SMART WD40_4 99 136 IPR001680 GO:0005515
Bva10g00773 476 SMART WD40_4 209 248 IPR001680 GO:0005515
Bva10g00773 476 SMART WD40_4 383 431 IPR001680 GO:0005515
Bva10g00773 476 PANTHER PROTEIN JINGUBANG 16 458 - -
Bva10g00773 476 MobiDBLite consensus disorder prediction 450 470 - -
Bva10g00773 476 PRINTS G protein beta WD-40 repeat signature 235 249 IPR020472 -
Bva10g00773 476 PRINTS G protein beta WD-40 repeat signature 418 432 IPR020472 -
Bva10g00773 476 PRINTS G protein beta WD-40 repeat signature 276 290 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00773 Bva-Chr10 6219089 6220837 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02041 06 13608130 13611191 Bva10g00773 10 6219089 6220837 BWGD
Bva10g00773 10 6219089 6220837 Bva08g00665 08 3429222 3431037 ECH
Bva10g00773 10 6219089 6220837 Bva10g00773 10 6219089 6220837 ECH