Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00764 ATGAATGAAGCGGGAAAGAAAATGCAGTCCGAGGGCAATGCGCGTCGACCGGCGAAGCAGCAACAGAGCATGGGGTTCCCGGCACCGCAACTCAAGGAACCTCTGCCTTGCCCGCGCTGCGATTCCACTACTACTAAGTTCTGCTACTACAACAACTACAATCTCTGCCAACCCCGCTATTTCTGCAAGTCCTGCCGCCGATATTGGACCCACGGCGGCACCCTCCGCAACGTCCCCGTAGGTGGTGGAACTCGCAAGGCATCAAACAAGTCTCGTACTAATTCTAATTCTTTTCATTCTCCTGCGACTGCCTGCAGCTCTGTTTTCGATGTCCCTTGCGTTAAACAAACGGAAACGGCATCCAAGTCTGGCGACCTGAATATCAATCACAAGGGGCCTCTTTTGTCGCTGAACTCGGAGGCGGAGAGCTCTAGGGGATTCAGTTTTGGTGGATGTGATGAGGTGGCACAGGGTTTGGATGGAACAGGTTCCGAGATGAGTGGTGGTGGGGTTGGACCATTTTCCGACTTTGGAGATTACGGCGGTGCACTACCAGTGCCGGGCCCTTCCTCAGAGTACAACATATGGCAACTGAGTGCCGGATTACTGCCTGACAGCGATTTCCTCGGGTGGCCCAACCTCGCCATTTCCACGCCAGACCTCCCACCCAAGAACCTAGACTG 683 0.5461 MNEAGKKMQSEGNARRPAKQQQSMGFPAPQLKEPLPCPRCDSTTTKFCYYNNYNLCQPRYFCKSCRRYWTHGGTLRNVPVGGGTRKASNKSRTNSNSFHSPATACSSVFDVPCVKQTETASKSGDLNINHKGPLLSLNSEAESSRGFSFGGCDEVAQGLDGTGSEMSGGGVGPFSDFGDYGGALPVPGPSSEYNIWQLSAGLLPDSDFLGWPNLAISTPDLPPKNLD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00764 227 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 221 IPR045174 GO:0003700|GO:0006355
Bva10g00764 227 MobiDBLite consensus disorder prediction 1 30 - -
Bva10g00764 227 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Bva10g00764 227 Pfam Dof domain, zinc finger 34 89 IPR003851 GO:0003677|GO:0006355
Bva10g00764 227 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Bva10g00764 227 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 8 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00764 Bva-Chr10 6173077 6174426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00764 12 219 C2C2-Dof Transcription Factor Family AT3G50410 36.179 6.16e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva10g00764 zf-Dof 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00764 - - tcc:18591281 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00764 10 6173077 6174426 Bva08g00654 08 3392756 3394025 ECH
Bva10g00764 10 6173077 6174426 Bva10g00764 10 6173077 6174426 ECH