Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00755 ATGTCTATCCCTCGCAAGTCTTCTTCTCCTTTACCATCTATGCCTTCTCTTGTTTCTGGTATCCAACAAACGGAAGGTGACAGCAATGCGGATAATTTCGTTCACAACATGGGGCAATCCCTTCAACAGCGCCGGCTTACCAGACAGAGGAAGCTCCGGCACCTCAGCCCCCACGACGTCGGCTTGCACTTCACTGACACCGAGCCTTCTTCTTTACCGGCTACGCCTCAGTCATCTCGTAAGTCCATGTCACCCGGTGGTTCTGACCACTGGTCATCGTCTGCGGTGCCGCAACCGCTGCCGCTCCCGGAATCACCGTTGACTCGAAGACCAGAGTCAACGACTCCAAATACAGGCCAGGCCCAGATAGTATCTACTCCCGTAGAACATCCCGGCTCTGCTTTTGGGAGGAAGGATCATGCAGTTGGAAATACGAAATCTTCAAGCAATTATGGAAGATCCTCCAGCGGTCCAGCCaatgaaaaagcaaaatataatttgagagTGAAAATTCCTGCTGCAAGTTTCTCGCCAGGTTGTACAAccccaagaagaaaaattatagatctttttccctctttccCTGCTTCTAATGCAGACAATTCAAATGGAGACCCTGGAGGACACTCTTCTCATATAGACTCTGAGAATATTTGCAACTTGAGTTTGCCTGTTTCTGCTAAGAGTGCCCCATCAAGTGTTTTATCCAGTCCTGTCAATAGTCCACGTAGATCAAgcaatatagatttttttgatCCTTCAATCATGGTTCCTCCGGAGTTTCAGGACAACCATGTCGGTCATTCTTTAAAAGTGTCACTAGCTAAAGCTCCGCATAGTCCAGATCATACTCCTCTTCGTAGTCTTGGGAGCCACAGTCCTTACGTCAATCCTAAAATTAGAGAATCACCTCAGCATCATAAATTCTTTTCCCGGGTGTGGCCTGAAAATAACCATGTAGATGCACATCCGTTGCCCCTTCCTCCGGGAGCTACATTACCTGTACCATCATTCTCGCAGCAACAATATCAATCAAGTGCCACGCATCATAGTGGAGAATATTCACTCACGAACAAAGGCAAATGGCAGAAAGGGCAACTGATTGGACGTGGTACATTTGGAAGTGTTTATCACGCAACCAACCTAGAGACTGGAGCATCGTGTGCAATGAAAGAGGTGGACATTATTCCTGATGATCCAAAATCTGCTGAATGTATAAAGCAACTAGAGCAGGAAGTCAAAATTCTCCGTCAACTAAACCATCCAAATATTGTCCAATATTATGGCAGTGACATAgTTGGTGATCacttatacatatatatggagTATGTTCATCCTGGTTCAATCAATAAATTTGTGCGTGAGCATTTCGGGGCTATGACAGAGTCTGTAGTTCGCAATTTCACCCGTCATATTCTATCTGGCTTGGCTTACTTGCACAGCACCAGCACTATCCACAGGGATATCAAAGGCGCAAACTTGCTGGTTGATTCATCAGGCATTGTCAAGCTTGCAGATTTTGGGATGGCAAAAATTCTGACAGTGCAATCATATGATCTTTCTTTGAAGGGCAGTCCATATTGGATGGCTCCAGAGCTTATGATGGCTACCATAAAGAAAGATACCAATCCTTCCCTTGCATTTGCTGTTGATATATGGAGCTTAGGGTGCACCATCATTGAAATGCTGACTGGCAGACCTCCTTGGAGCGAGTTTGAAGGGCCTCAAGCCATGTTCAAGGTTCTGCATAAAACCCCACCTATACCTGAGACATTATCATCAGAGGGAAAGGATTTTCTCCAGCAATGTTTTCTTCGAAATCCTGCAGAAAGACCATCCGCAGCAAAGCTGCTCGACCATGCCTTTGTACGAAACTTGCACGATCTTGATCAAGGCGTTCTGGTTCGGCCACAACGGCACCTGAGAATAGACATGGGAGATAATTCACGAAGTCCCACAGACTCTGATAAACAAAACCGCGATGTTAATGTAACATTAATACCATCCTCCATGGGCACACGGTTTATGAGCAAACTTCAGAGATTAATCggcgATACTTCCCACCAGTCTATTGCTAACACTGCCATTACATCTTCTCATTCCTCTGAACCAGAAGTTAATATTCGTCGATCTACCTTGACAACTAGGACCCTCAATTCCATGTCTGTTCCAAACTCCAGGAACATACCCCTCACTGTCGTGAGAATGATCACGCATCTTTG 2222 0.4383 MSIPRKSSSPLPSMPSLVSGIQQTEGDSNADNFVHNMGQSLQQRRLTRQRKLRHLSPHDVGLHFTDTEPSSLPATPQSSRKSMSPGGSDHWSSSAVPQPLPLPESPLTRRPESTTPNTGQAQIVSTPVEHPGSAFGRKDHAVGNTKSSSNYGRSSSGPANEKAKYNLRVKIPAASFSPGCTTPRRKIIDLFPSFPASNADNSNGDPGGHSSHIDSENICNLSLPVSAKSAPSSVLSSPVNSPRRSSNIDFFDPSIMVPPEFQDNHVGHSLKVSLAKAPHSPDHTPLRSLGSHSPYVNPKIRESPQHHKFFSRVWPENNHVDAHPLPLPPGATLPVPSFSQQQYQSSATHHSGEYSLTNKGKWQKGQLIGRGTFGSVYHATNLETGASCAMKEVDIIPDDPKSAECIKQLEQEVKILRQLNHPNIVQYYGSDIVGDHLYIYMEYVHPGSINKFVREHFGAMTESVVRNFTRHILSGLAYLHSTSTIHRDIKGANLLVDSSGIVKLADFGMAKILTVQSYDLSLKGSPYWMAPELMMATIKKDTNPSLAFAVDIWSLGCTIIEMLTGRPPWSEFEGPQAMFKVLHKTPPIPETLSSEGKDFLQQCFLRNPAERPSAAKLLDHAFVRNLHDLDQGVLVRPQRHLRIDMGDNSRSPTDSDKQNRDVNVTLIPSSMGTRFMSKLQRLIGDTSHQSIANTAITSSHSSEPEVNIRRSTLTTRTLNSMSVPNSRNIPLTVVRMITHL 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00755 740 MobiDBLite consensus disorder prediction 641 660 - -
Bva10g00755 740 MobiDBLite consensus disorder prediction 142 160 - -
Bva10g00755 740 MobiDBLite consensus disorder prediction 1 160 - -
Bva10g00755 740 ProSiteProfiles Protein kinase domain profile. 362 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00755 740 SMART serkin_6 362 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00755 740 SUPERFAMILY Protein kinase-like (PK-like) 341 656 IPR011009 -
Bva10g00755 740 MobiDBLite consensus disorder prediction 1 45 - -
Bva10g00755 740 Gene3D Transferase(Phosphotransferase) domain 1 358 663 - -
Bva10g00755 740 MobiDBLite consensus disorder prediction 641 657 - -
Bva10g00755 740 MobiDBLite consensus disorder prediction 68 95 - -
Bva10g00755 740 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 22 731 - -
Bva10g00755 740 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Bva10g00755 740 MobiDBLite consensus disorder prediction 108 127 - -
Bva10g00755 740 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 22 731 - -
Bva10g00755 740 Pfam Protein kinase domain 363 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00755 Bva-Chr10 6129735 6134828 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva10g00755 Pkinase 3.2e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00755 10 6129735 6134828 Bva06g02055 06 13699089 13703342 BWGD