Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00740 ATGGAGAGAACAAAGTCTTCCCTTCTACAAATTCAGCCCCCAACTTATGGAAACTTGGTTACCATTCTCAGTATCGACGGGGGTGGTATTAGAGGCATCATCCCTGCTACCATTCTTGCTTTCCTCGAATCTCAACTGCAGGAGCTGGATGGCGAGGATGCAAGGCTTGCAGATTACTTTGATGTGATTGCAGGAACAAGCACAGGGGGTCTTGTAACCGCCATGTTAACCGCtccaaatgaaaagaaacGTCCACTTTTTGTTGCAAAGGATATCAAGCCCTTTTACTTGGAGCACTGCCCAAAAATTTTCCCACAGAAAAGAGGCCTCGCTGGGACAGTGGTAGCAAAGTTATTCCAATCATTAGGAGGACCCAAATACGATGGAAATTACCTTCATCGGATAATGAAGGAGAAGCTCGGAGAATCTCGGCTGCATGAGACCCTCACCAACGTTGTCATTCCTACTTTCGATATCAAGAAATTGCAGCCAACCATATTCTCATCTTATCAGATCAAGAAGTCTCCATACTTGGATGCTCGACTCTCTGACATATGCATCAGCACGTCAGCTGCACCTACTTATTTTCCTACTTACTACTTCACAAGCAAAGACCCAGAAGGGAACGTACATGAATTCAACCTAACTGATGGTGGTGTTGCTGCCAATAATccgACTTTAGTTGCCGTGAACCAAATAACCAAACAGATCATTGAGGAGAATTCTGATTTCTTTCCAATCAAGCCCATGGACTTTGGTCGCTTTCTAGTGATCTCAATAGGCACTGGAACACCCAAGAATGAACAAAAATTCAATGCTAATATCGCAGCCAAATGGGGCATATTAGATTGGCTAACACACGGTGGTTCTACTCCCTTAATCGATGTCTTTACTCAATCGAGTGCAGATATGGTTGATTTCCATCTAGCTACCGTCACTCAAGCACTTCATTCACAAGATAAATACCTTCGGATACAGGATGACACATTGACCGGTACAGAATCTTCAGTTGATATtgccacaaaagaaaatttagaggCACTGGGGCAAATTGGTGAAAGGCTATTGAAGAAACCAGTCTCAAGGATGAACCTAGAAACGGGTCTATCTGAACCAGTGGAAAATGCAGGAACTAACGAGGATGCCCTCAGAAaGTTTGCTAAAATGCTTTCTGAAGAGAGGAGACTCCGAGAAATGAAATCCCCACACACCAAGAAGGCCATATTGAGCCACGTGGATCGTTCGTTGTCCATCAATTTCCATGCTTG 1268 0.4267 MERTKSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLESQLQELDGEDARLADYFDVIAGTSTGGLVTAMLTAPNEKKRPLFVAKDIKPFYLEHCPKIFPQKRGLAGTVVAKLFQSLGGPKYDGNYLHRIMKEKLGESRLHETLTNVVIPTFDIKKLQPTIFSSYQIKKSPYLDARLSDICISTSAAPTYFPTYYFTSKDPEGNVHEFNLTDGGVAANNPTLVAVNQITKQIIEENSDFFPIKPMDFGRFLVISIGTGTPKNEQKFNANIAAKWGILDWLTHGGSTPLIDVFTQSSADMVDFHLATVTQALHSQDKYLRIQDDTLTGTESSVDIATKENLEALGQIGERLLKKPVSRMNLETGLSEPVENAGTNEDALRKFAKMLSEERRLREMKSPHTKKAILSHVDRSLSINFHA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00740 422 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 230 IPR002641 GO:0006629
Bva10g00740 422 Gene3D Cytosolic phospholipase A2 catalytic domain 10 402 - -
Bva10g00740 422 PANTHER XYLOSE ISOMERASE 1 406 - -
Bva10g00740 422 PANTHER PATATIN 1 406 - -
Bva10g00740 422 Pfam Patatin-like phospholipase 23 229 IPR002641 GO:0006629
Bva10g00740 422 SUPERFAMILY FabD/lysophospholipase-like 18 381 IPR016035 -
Bva10g00740 422 CDD Pat17_isozyme_like 17 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00740 Bva-Chr10 6050525 6053016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00740 1 408 Miscellaneous Gene Families AT2G26560 63.725 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00740 10 6050525 6053016 Bva06g02067 06 13772756 13774839 BWGD
Bva10g00740 10 6050525 6053016 Bva10g00740 10 6050525 6053016 ECH