Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00729 ATGTCTACTAAAAGCGAAAGCCAAACTGTCCCCCTCTCGGTGCTTCTTAAACGTGAATTGgcaaatgagaaaattgagaGGCCAGAAATTTTGCATGGTCAAGCCAGCCAGAGCAAGAAAGGCGAGGATTTGACACTATTAAAGACGGAGTGCCAAAGGATGGTGGGAGATGGAGTGTTTACCTATTCTGTTTTCGCGTTATTTGATGGACACAACGGATCTGCTGCTGCTATTTATACCAAGGAGAATCTCCTAAATAATGTTCTAAGTGCCATTCCTTCAGATCTTAGCAGAGATGAATGGATAGCGGCCTTGCCAAGGGCTTTGGTGTCAGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGCACAAACATCGGGAACAACTGTAACCTTTGTCATTATAGAAGGATGGGTTATTACTGTTGCATCTGTTGGTGATTCCCGTTGCATATTGGAACCTGCTGAAGGTGGAGTTTACTATTTGTCAGCAGATCATAGGCTAGAAACCAATGAAGAGGAGAGGTTGCGAATCACCTCAAGTGGGGGTGAGGTGGGTCGGTTGAATGCTGGTGGAGGTGCAGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGTTTGTGTCTTTCACGATCCATTGGTGATATGGACATTGGTGAATTCATTGTCCCTGTTCCTTTTGTAAAGCAAGTAAAGCTATCCACAGCTGGAGGCAGGCTTGTTATCTGTAGCGATGGTGTTTGGGATAACCTAACCGCTGAAGAAGCCCTTGATTGTTGTCGTGGCATGGCAGCTGAGGCTGCAGCATCGCAGATTGTCAAGGAATCTGTACAAGCAAAGGGACTTAGGGATGATACAACCTGTATCGTTATTGATGTATTACCCCATGAAAAGCCACCATCTTCTTTGCCACAACCAAAGAAACCGGGAAAAGGAATGTTTAAATCCATGTTTCGTAAAAAGTCTTCTGAATCATCCTCTTTTATAGACAAAGAGTACATGGAGCCAGGTGTTGTAGAGGAAATGTATGAGGAAGGATCTGCTATGCTTTCTGAGAGGCTAGATACAAAATACCCGGTCTGCAACATGTTTAAGTTGTTTATGTGTGCCGTGTGTCAATTAGAGATGAAACCTGGGGAGGGTATTTCGATACATGAAGGTGCCCCCAACCCAGGAAAATTGCGCCCCTGGGATGGACCCTTTCTTTGTTCAAGttgccaagaaaagaaagacgCCATGGAAGGGAAAAGAACATCAGATAGACTTAGCAGCGGAAGTGACTA 1283 0.4326 MSTKSESQTVPLSVLLKRELANEKIERPEILHGQASQSKKGEDLTLLKTECQRMVGDGVFTYSVFALFDGHNGSAAAIYTKENLLNNVLSAIPSDLSRDEWIAALPRALVSGFVKTDKDFQQKAQTSGTTVTFVIIEGWVITVASVGDSRCILEPAEGGVYYLSADHRLETNEEERLRITSSGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDIGEFIVPVPFVKQVKLSTAGGRLVICSDGVWDNLTAEEALDCCRGMAAEAAASQIVKESVQAKGLRDDTTCIVIDVLPHEKPPSSLPQPKKPGKGMFKSMFRKKSSESSSFIDKEYMEPGVVEEMYEEGSAMLSERLDTKYPVCNMFKLFMCAVCQLEMKPGEGISIHEGAPNPGKLRPWDGPFLCSSCQEKKDAMEGKRTSDRLSSGSD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00729 427 Pfam Protein phosphatase 2C 62 279 IPR001932 -
Bva10g00729 427 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Bva10g00729 427 Gene3D - 34 299 IPR036457 -
Bva10g00729 427 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Bva10g00729 427 PANTHER ALPHABET, ISOFORM E-RELATED 3 423 - -
Bva10g00729 427 SMART PP2C_SIG_2 46 293 IPR001932 -
Bva10g00729 427 SMART PP2C_4 26 291 IPR001932 -
Bva10g00729 427 MobiDBLite consensus disorder prediction 408 427 - -
Bva10g00729 427 CDD PP2Cc 62 293 IPR001932 -
Bva10g00729 427 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00729 Bva-Chr10 5994923 5999849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00729 1 427 PP2C-type Phosphatase Gene Family AT1G47380 79.439 0.0 725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00729 10 5994923 5999849 Bva06g02075 06 13797328 13802179 BWGD
Bva10g00729 10 5994923 5999849 Bva10g00729 10 5994923 5999849 ECH