Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00724 ATGGAAGGTTCGTCTCTTCCAAAGCTGGTGAAGACACCATCGTCTAAAGCCTTGGTCATCAGAATCAATTTGGTCGTCCTcgctttcttccttcttctttatGCGACCTTTCTTCTCCGTCCATCATCTTCGGTCTATTTCGAGAATGCAGCCTCCCTTGTTAGGTGCTCATTGCGCGAATGCCATCATAAGACCGAACAGAGCATCAAAATGAAAGCAGTGTTGGAGGAGCCTCAAACCAAATCGCGGAGGCCAAAGGCCGCAGAGGGTAATGCGAGTAAGATAGAGGTACCTAGCTTGTTTCGTGAAATGGGGAAAGGAATGAAGATCGGACTGGTAAACATGGATGAAGATGATGTGAGTGAATGGAGCTCACAAGGAGAAACAATACCCATTTATTTTGAGAGGGTATCACAGTTTTTCAATTGGACAGATTTGTTTCCTGAATGGATAGACGAGGAAGAAGAGAGTGATGTTCCAACATGCCCTGAGATACCGATGCCAGAGTTTTCAGGGTATGAAAGCATGGACGTGGTCGTGGCTAAGCTGCCATGCAAGTATCCTCAAGAGGGGTGGAGAAGGGATGTTTTCCGTTTACAAGTTCATCTTATAGTGGCAAATCTGGCTGTGACAAAACTGAGGAAGGATTGGAATTGGAAGACCAAAGTGGTTTTCTTGAGCAAGTGTAGGCCAATGCTGGAGTTGTTTCTGTGTGATGACCTGGTCAAGCAAGAAGGTGATTGGTGGTATTTTCAACCAGGAGTGAAGAGGTTGGAGCAGAAAGTAACATTGCCCATTGGGTCCTGCAGGTTGGCTTTGCCTCTATGGGAGCAAGGAATTGACGAGGTGTACGACTTGTCCAAGATCCAAAGAAGCGTCGCAAGCAAAGCGAGAATGAAGCAGGAAGCCTACGCTACACTGCTGCACTCCTCGGAAGGCTATGTTTGTGGCGCCATAACACTTGCACAAAGCCTTCTCCGAACCGGCACCACACGCGACCTTATCCTGCTCATAGACAGTTCTATCTCGGTTCCCAAACGCGAAGCACTCGTTGCTGCGGGTTGGAAGATCCGAATCATCACCCGAATCCGAAACCCGAGAGCAGAGAAAGACACTTACAACGAGTACAACTACAGCAAGTTCCGTCTATGGCAGCTGACGGAGTACAAAAAGATTATCTTCATCGACTCCGACATCATCGTCCTGCGCAATCTGGACATCCTCTTCCACTTCCCTCAGATGTCGGCCACTGGCAACGACCAGTCCATATTCAACTCAGGCATCATGGTGATCGAACCCTCCAACTGTACGTTCAATATATTAATGGAGAATCGAGAAGAGATCATATCGTACAACGGAGGGGACCAAGGGTTCCTGAACGAGATTTTCGTGTGGTGGCACCGGTTTCCGAGGAGGGTTAACTTCTTGAAGAATTTCTGGTCGAATACGACGTTAGAGGCAAGCGTGAAGAACGGGCTATTCGGGTCAGACCCACCCAAGTTGTACGCGATCCATTATCTGGGATTGAAGCCGTGGCATTGTTACAGAGACTACGACTGTAATTGGGACGTGGAGGATCAACGCGTTTATGCTAGCGACGTGGCTCACGCGAGGTGGTGGAAGCTTCACGACGAAATGGATGAGAAGTTGCAGCGTCTGTGTAGGTTAACAAGACAGCGTAGGACGGAGTTGAACTGGGAAAGGAGGAGATCTTGGAGGAGAGGATCAGCTGATGGGCATTGGAGAATGAATATTACTGATCGCAGACGATCTGGTTCTCTTCTGAtggatta 1793 0.4774 MKQEAYATLLHSSEGYVCGAITLAQSLLRTGTTRDLILLIDSSISVPKREALVAAGWKIRIITRIRNPRAEKDTYNEYNYSKFRLWQLTEYKKIIFIDSDIIVLRNLDILFHFPQMSATGNDQSIFNSGIMVIEPSNCTFNILMENREEIISYNGGDQGFLNEIFVWWHRFPRRVNFLKNFWSNTTLEASVKNGLFGSDPPKLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHARWWKLHDEMDEKLQRLCRLTRQRRTELNWERRRSWRRGSADGHWRMNITDRRRSGSLLMD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00724 299 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 252 IPR029044 -
Bva10g00724 299 Pfam Glycosyl transferase family 8 10 215 IPR002495 GO:0016757
Bva10g00724 299 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 2 293 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Bva10g00724 299 PANTHER GLYCOGENIN SUBFAMILY MEMBER 2 293 - -
Bva10g00724 299 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 254 IPR029044 -
Bva10g00724 299 CDD GT8_Glycogenin 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00724 Bva-Chr10 5971458 5974640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00724 2 298 Glycosyltransferase AT4G33330 73.737 2.54e-168 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00724 10 5971458 5974640 Bva10g00724 10 5971458 5974640 ECH