Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00715 ATGGATGGTTATGATGGGACGGTGAGGCTTGGAGCTTTGAACTTGAAGCATGATCGCAGTGAACTAGATTCGGGGCCTGATGTATCAGTTTCTTCTCCAGTCACCAGACAGAAGGCCACTGCCGCTAAGCAGTTCATTGAGAATCATTACAAGAATTATCTCCAAGGACTGCAGGATCGTAAAGAGAGACGTAGAGCAGTTCAAAGGAGAGCACAAGAAGCTCAAGTATCAATTGAAGAACAGGAGGAAATGCTGCGGAATTTGGAGCGCCGGGAAACTGAATATATGAGGCTGCAGAGACGTAAAATTGGAATTGATGACTTTGAGCAATTAACAGTAATCGGTAGAGGCGCTTTTGGTGAGGTAAGGCTGTGTCGTGCTAAGAGTACAGGAGAGATTTTTGctatgaagaaattgaagaaatcagATATGCTTAGCCGTGGACAGGTGGAACATGTTCGATCTGAGAGGAACCTGCTGGCAGAGGTGGATAGTCGATGCATAGTGAAACTTGAATACTCATTCCAAGACTCAGATTTCCTATATCTTATTATGGAGTATTTACCGGGAGGAGACATTATGACATTATTAATGAGAGAAGATATTCTTTCTGAAGATGTTGCTCGCTTCTACATAGCCGAAAGCATTCTAGCAATACACTCAATACATCAACACAACTATGTACATAGGGATATAAAACCAGATAATCTGATTCTGGATAGAAATGGCCATTTGAAGCTTTCAGACTTCGGCTTATGCAAACCTCTAGATGATAAATATTCAACAATTTTGTTGGAAAGTGAAGATTTTACCAGTCATGAATCAACTAGTGAATCTGAAGGATATTCTACCTCCCCTTGGTTAATGCCGAAAGAGCAATTACAACAGTGGAAACGCAATCGTCGAGCATTGGCATATTCAACTGTTGGAACCCTTGACTATATGGCACCTGAAGTTTTGGTAAAAAAGGGTTATGGAATAGAATGTGATTGGTGGTCTCTTGGAGCAATCATGTATGAGATGCTTGTCGGGTGTCCTCCTTTTTGTTCTGACGATCCAAGGATGACATGTCGTAAGATAATCAACTGGAAAACATGCCTGAAATTTCCCGAAGAACCAAAGATATCAGTTGAAGCCAAGGATCTGATCTGTCGCTTCCTATGTGACGTTGAAACAAGACTGGGGACCAGAGgagttgaagaaataaagGCACATCCATGGTTTAGAGGTATTCAATGGGATATGCTTTATGAAATGGAAGCTGCATATAAACCTACTGTCACAGGAGACTTGGACACGCAAAACTTTGAGAAGTTTCATGAAGTTGAAGGCCCACCGTCCACAACGTCTACTGTCGGACCTTGGCGAAAGATGCTGACATCCAAAGACACCAATTTCATAGGATATACTTTCAAGAAATCAGACATTCTTAAATCACTTGAAGGTTCTGGTACTGATGTCAGAACAAATGGATCATCAAATACCCCTTCTCTAGTTTCCTTGTTAGGACGGATTGACTTGCAAGAAACTTCCATTCCAGAAAGTGAACAGAAGCCGGAAACTTG 1565 0.4083 MDGYDGTVRLGALNLKHDRSELDSGPDVSVSSPVTRQKATAAKQFIENHYKNYLQGLQDRKERRRAVQRRAQEAQVSIEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTVIGRGAFGEVRLCRAKSTGEIFAMKKLKKSDMLSRGQVEHVRSERNLLAEVDSRCIVKLEYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDRNGHLKLSDFGLCKPLDDKYSTILLESEDFTSHESTSESEGYSTSPWLMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLVKKGYGIECDWWSLGAIMYEMLVGCPPFCSDDPRMTCRKIINWKTCLKFPEEPKISVEAKDLICRFLCDVETRLGTRGVEEIKAHPWFRGIQWDMLYEMEAAYKPTVTGDLDTQNFEKFHEVEGPPSTTSTVGPWRKMLTSKDTNFIGYTFKKSDILKSLEGSGTDVRTNGSSNTPSLVSLLGRIDLQETSIPESEQKPET 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00715 521 Gene3D Phosphorylase Kinase; domain 1 99 193 - -
Bva10g00715 521 SMART serkin_6 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00715 521 SUPERFAMILY Protein kinase-like (PK-like) 83 461 IPR011009 -
Bva10g00715 521 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 507 - -
Bva10g00715 521 SMART pkinase_C_6 409 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva10g00715 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Bva10g00715 521 Gene3D Transferase(Phosphotransferase) domain 1 194 425 - -
Bva10g00715 521 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva10g00715 521 Pfam Protein kinase domain 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00715 521 CDD STKc_NDR_like 106 472 - -
Bva10g00715 521 Coils Coil 64 101 - -
Bva10g00715 521 ProSiteProfiles Protein kinase domain profile. 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00715 521 Pfam Protein kinase C terminal domain 427 471 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bva10g00715 521 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 507 - -
Bva10g00715 521 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00715 Bva-Chr10 5922937 5928844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00715 1 509 AGC Kinase Gene Family AT5G09890 77.930 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bva10g00715 Pkinase 6.4e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00715 10 5922937 5928844 Bva10g00715 10 5922937 5928844 ECH