Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00702 ATGGGGGAGACTCCGTGCCCCGAAGCGGTTTTGCGTGCGCGTGCGATTCTCCCGCCCGGTTGCCGATTCTACCCGTCTGAAGAGCAACTTCTTTGCTACTATCTCACTAACAAGAACGCCAATACGACCAGAAACGAAAATGAATACATCCATGGCTGCAATTTAATCAGAGAGCTCGACCTTTACGATCACGATCCTTTTGAATTGCCAGCTACTTCGTGCTTTTCTTATGGTTATGGGGGTAGAAAGAGGCATTGGTACTGTTATACAGTCAGCGTTGTGAAGGAGACCAGAGGAAAGAGTAGGAAGGTCAGGGGCGGTTTTTGGAGGAGAAGAGGAAGGGTTAGGAATGTTTTCACTAATGGTGGGAATATCCTCGTGGGCACAAGGACCAATTTCGTCTTTTATTTAGGGAATTCGCTCAAGAAAGCCGTCAAGACTGATTTGATTATCTATGAGTATGCATTAGCTGATCGTCTTATGGCTTCTTTCGTCCTTTGCCGTGTATTTATTAAACCTCGTCTGAGGTTTACTTTATCAGAAAATGTTCTGAGTTCTTATGCTGAAGAAAGTGTTTCAGCAGTACGTCACATTGGTATTCAGCATGATGGATGTGTTACTCCGGATGATGTTGCTGCTAAACTGTCTAATGATACCACTATTGATAGAAACAATGAGATTTCAGTGGATCCACTGAGGCCTGCTAGTGAACTAGGTGGCCATCAAGTCTTGACTGCACATGTTAATCCTGCTGCTTTCCAATGTTCTCTAGCTCCTCAGGGCAGTCAGCAGGGAAGGTTTCCTGGACTTCTTGACGGTGATGCAATGCCTGTTGAAGATTTGACGTCTCAGCATTTACTTACCATCCTGGAGGAAGATTTCATAGAGTTGGACGATCTTTCATG 905 0.4497 MGETPCPEAVLRARAILPPGCRFYPSEEQLLCYYLTNKNANTTRNENEYIHGCNLIRELDLYDHDPFELPATSCFSYGYGGRKRHWYCYTVSVVKETRGKSRKVRGGFWRRRGRVRNVFTNGGNILVGTRTNFVFYLGNSLKKAVKTDLIIYEYALADRLMASFVLCRVFIKPRLRFTLSENVLSSYAEESVSAVRHIGIQHDGCVTPDDVAAKLSNDTTIDRNNEISVDPLRPASELGGHQVLTAHVNPAAFQCSLAPQGSQQGRFPGLLDGDAMPVEDLTSQHLLTILEEDFIELDDLS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00702 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 14 301 - -
Bva10g00702 301 Pfam No apical meristem (NAM) protein 18 156 IPR003441 GO:0003677|GO:0006355
Bva10g00702 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 301 - -
Bva10g00702 301 Gene3D NAC domain 26 175 IPR036093 GO:0003677|GO:0006355
Bva10g00702 301 ProSiteProfiles NAC domain profile. 17 172 IPR003441 GO:0003677|GO:0006355
Bva10g00702 301 SUPERFAMILY NAC domain 11 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00702 Bva-Chr10 5841757 5844675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00702 13 172 NAC Transcription Factor Family AT1G69490 30.857 9.25e-20 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva10g00702 NAM 4.8e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00702 10 5841757 5844675 Bva10g00702 10 5841757 5844675 ECH