Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00699 ATGCCTAACATCCAGTTTTGCTCCATGGGATCAATTGGAAGCAGCATGAAGGTGCATCAGTTGGCACGTGGATTCTGGGAGCACGAACCCTCTCTCACGCTTGGTTGCAAGCGTTTACGCCCTCTTGCTCCCAAGCTTCCAAACACCGAAACTCCCGTCGCAGCTTTCGATCTCAAGAGTTTCATCAGACCCGAAAGTAGCCCCATAAAACTGGGATCCTCAGTCTCAGACCATAACAAGAAAGATTCAACACCACAACCTCAGCAGGCGCAGGTGCagGTGGAAACGCATCCAGGAGGGACGCGGTGGAATCCGACGCAAGAACAGATAGGGATATTGGAGATGTTATACAGAGGTGGGATGAGAACTCCGAATGCTCAGCAGATAGAGCAGATCACGGCTCAGCTTGGCAAATACGGCAAAATCGAAGGAAAAAACGTTTTCTATTGGTTCCAGAATCATAAGGCACGCGAGAGACAGAAGCAGAAGCGTAACAGTCTTGGCCTCATTCATAGTCCACGAACTCCGCCGCCCATTACTACTATAACTTTGGAGACCTCAAgggGGGAAGTGATCGTGGAAAGAGAGGAAGACAGTCcatacaagaagaagaagtgtaGGAGCTGGGGATTTGAGTGCTTGGAAGAGCAAAGCAGGTCACCAAGTACTAAAGAGGAGGAACATAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATG 725 0.4828 MPNIQFCSMGSIGSSMKVHQLARGFWEHEPSLTLGCKRLRPLAPKLPNTETPVAAFDLKSFIRPESSPIKLGSSVSDHNKKDSTPQPQQAQVQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLIHSPRTPPPITTITLETSRGEVIVEREEDSPYKKKKCRSWGFECLEEQSRSPSTKEEEHRTLELFPLHPEGR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00699 241 MobiDBLite consensus disorder prediction 215 241 - -
Bva10g00699 241 SUPERFAMILY Homeodomain-like 97 167 IPR009057 -
Bva10g00699 241 SMART HOX_1 98 165 IPR001356 GO:0003677
Bva10g00699 241 PANTHER WUSCHEL-RELATED HOMEOBOX 4 16 241 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bva10g00699 241 Gene3D - 100 167 - -
Bva10g00699 241 CDD homeodomain 101 162 IPR001356 GO:0003677
Bva10g00699 241 ProSiteProfiles 'Homeobox' domain profile. 96 161 IPR001356 GO:0003677
Bva10g00699 241 Pfam Homeodomain 101 160 IPR001356 GO:0003677
Bva10g00699 241 MobiDBLite consensus disorder prediction 67 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00699 Bva-Chr10 5832459 5833547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00699 16 167 Wox Gene Family AT1G46480 62.500 3.65e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva10g00699 Homeodomain 5.7e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00699 10 5832459 5833547 Bva10g00699 10 5832459 5833547 ECH