Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00698 ATGGAAGAAAGAGATTGCTGTTCGATGACATCAAGCAGCCCAGAGAAGAGAAAGCAGCAAGATGAAAAGACGACAGCAGCAAGAGagaataaagataaagagaaaCCATACAGAGGGATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCTGAGATTCGGGAACCAAACAAGAGGTCAAGGATATGGCTCGGTTCTTACACCACACCTGTCGCAGCCGCACGTGCTTATGATACCGCCGTTTTTTATCTGAGAGGACCTTCCGCTCGCCTTAACTTCCCCGAATTGTTATTCCAAGAAGACGACCTTTTCATACAAGGAGAAGGTCAAGGTGAAGCCGCCGACATGTCTGCCGATTCCATACGCAAGAAAGCCACCGAAGTCGGTGCCAGAGTTGATGCTCTCCAAACCGCTCTTCGTGCCTCTTCCCAATCCAATTCCAGTTCCAACTCTTCCGAGAAACCCGACTTGAATGAGTATCCCCAACCCGAAGACTCCCTTGACGATTG 506 0.4842 MEERDCCSMTSSSPEKRKQQDEKTTAARENKDKEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQEDDLFIQGEGQGEAADMSADSIRKKATEVGARVDALQTALRASSQSNSSSNSSEKPDLNEYPQPEDSLDD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00698 168 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Bva10g00698 168 MobiDBLite consensus disorder prediction 136 168 - -
Bva10g00698 168 Pfam AP2 domain 37 85 IPR001471 GO:0003700|GO:0006355
Bva10g00698 168 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Bva10g00698 168 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Bva10g00698 168 MobiDBLite consensus disorder prediction 1 37 - -
Bva10g00698 168 MobiDBLite consensus disorder prediction 136 156 - -
Bva10g00698 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 165 - -
Bva10g00698 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 165 - -
Bva10g00698 168 SUPERFAMILY DNA-binding domain 36 94 IPR016177 GO:0003677
Bva10g00698 168 PRINTS Ethylene responsive element binding protein signature 75 95 IPR001471 GO:0003700|GO:0006355
Bva10g00698 168 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Bva10g00698 168 CDD AP2 37 95 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00698 Bva-Chr10 5824310 5825366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00698 35 168 AP2-EREBP Transcription Factor Family AT2G23340 59.184 2.38e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva10g00698 AP2 2.8e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00698 10 5824310 5825366 Bva10g00698 10 5824310 5825366 ECH