Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00688 ATGGAGTATCTAGGGATTGATCTGACCTGTGCTCTTGGATCTCTCCGCCTTGGCCACTTCCCGGAGAAGGACTGTTTGCTTCCTCTTATTTCCAAACTCCTCGGCTACGCAATCGTCGCCGCTTCCACCACCGTTAAACTCCCCCAGattttaaaaattttgaagcataGAAGTGTCAGAGGCCTTAGCATGTTGTCCTTTGAGCTTGAGGTTGTTGGCTACACCATAGCATTAGCCTACTGTCTTCACAAAGGGCTTCCGTTTTCAGCGTATGGGGaactattatttcttttaatccaAGCCATAGTTTTGGTTGCTGTAATCTACTACTTTTCTCAACCTCTCAGTACCAAGACATGGATCCGGGCATTACTATATTGTGCTGTCGGACCTACTATCTTAGCCGGCAAAATTGACCCTCTTCTCTTTGAAGCTCTGTATGTGTGCCAGCATGCAATCTTTCTCTTCGCCAGGATCCCGCAAATATGGGAAAACTTCTCCAATAAAAGTACAGGAGAGCTCAGCTCCTTGACCTGTTTCATGAATTTTGGAGGTTCCTTGGTTAGAGTCTTCACCAGCATCCAAGAAAATGCACCCAAAAGTGtCTTGATGGGCTCTGTAATTGGTATTGCCACAAATTTTACTATCTTAAGTCAGATAGTGTTGTACCAAAAGCCCCAGACAGGAAAAGATAAGAAAGCGCAGTA 707 0.4342 MEYLGIDLTCALGSLRLGHFPEKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHRSVRGLSMLSFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQAIVLVAVIYYFSQPLSTKTWIRALLYCAVGPTILAGKIDPLLFEALYVCQHAIFLFARIPQIWENFSNKSTGELSSLTCFMNFGGSLVRVFTSIQENAPKSVLMGSVIGIATNFTILSQIVLYQKPQTGKDKKAQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00688 235 Pfam PQ loop repeat 30 89 IPR006603 -
Bva10g00688 235 Pfam PQ loop repeat 151 201 IPR006603 -
Bva10g00688 235 Gene3D - 29 113 - -
Bva10g00688 235 PIRSF Mpdu1 10 235 IPR016817 -
Bva10g00688 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 227 - -
Bva10g00688 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 227 IPR016817 -
Bva10g00688 235 Gene3D - 147 234 - -
Bva10g00688 235 SMART ctns 44 75 IPR006603 -
Bva10g00688 235 SMART ctns 156 187 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00688 Bva-Chr10 5768205 5770983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00688 1 223 Miscellaneous Gene Families AT4G07390 74.439 2.52e-125 353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00688 10 5768205 5770983 Bva10g00688 10 5768205 5770983 ECH