Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00687 ATGGGCCAGTCTGCTTCGACGGCCGCAATCGCTTGCCGTCGTGAATCCTCACACAGCCATCGGTCCAAGACCGGATCAACGGCCTTGGTTTCTCCGATGCTTGCCGACGTGAACACCGAGTCCAGTAATGAGGGAATCGATGGAGGCCCTGACTATATTTCTGATCTTCCCGACGAGTGCTTGGCTTGCATCTTCCAGTCACTCGGCTCCGCCGACCGTAACCGATGCTCACTCGTTTGCCGACGCTGGCTTCGGATCGAGGGCCAGAGCCGTCACCGTCTCTCCCTCAACGCTCAATCAGATCTCCTTTCGGTTGCcccctctcttttctctcgTTTCGATTCTGTCACAAAACTCGCCTTGAAATGCGACCGCAGATCCATGAGCATTGGGGACTACGCGCTTGTTCTCATCTCTGAACGATGCCCTAATCTGACTCGCCTAAAACTCCGTGCCTGCCGTGAACTAACCGATGTTGGCATGGAGGGCTTTGCCAAGAATTGCAAGGGTTTGAAGAAACTTTCCTGTGGATCTTGCACTTTCAGGGCGAAGGGGATGAACGCCGTGCTCGATAATTGTGCTCTGGAAGAATTATCTGTGAAGCGTCTCAGAGGGATTACGGATGGGGCTGGCGCTGAGCCGATTGGACCCGGTGTTGCAGGGTCGTCCCTCAAAACGATTTGTTTAAAGGAGCTTTATAATGGACAGTGTTTCGGGTCGCTTATTCTTGGCTCAAAGAATCTAAGAACATTGAAGCTTTTCAGATGTTCTGGCGATTGGGACAAGCTTTTTCAAGTTATGGCAGATCAGGTTACAAGTATGGTTGAAGTCCACCTCGAGAGGCTGCAGATTAGTGATATTGGACTGACAGCTATCTCAAATTGTTCAAGTCTGGAAATTTTGCATCTTGTAAAGACCCCAGAGTGCACGGACATGGGACTTATCTCAATTGCGGAACGGTGTAAGCTGCTAAGGAAGCTTCATATTGATGGATGGAAGACAAATCGTATAGGTGATGAAGGTTTAACAGCAGTTGCCAAATGTTGTCCTAATATTCAAGAACTAGTTCTTATTGGCGTGAATCCTACTACAGCGAGTTTGGAAATGTTAGCATCCAATTGCCAGAATCTAGAGCGATTGGCATTATGTGGAAGTGATACGGTTGGTGATGCTGAGATATCGTGCATTGCATCAAAATGTGTCGCATTGAAGAAACTCTGCATTAAGAGTTGCCCTGTCTCTGATCTAGGAATGGAAGCTCTAGCAGGTGGGTGCCCGAATTTGGTGAAAGTGAAGGTTAAGAAATGTAAAAGTGTAACCTCTGAGGGTGCAGATTTGTTGAGGTTGAGTAGGGGATCAGTTGCTGTTAATTTAGATACTGGCGAGACAGAACATCACGACGCAAGTGCTAGTGATGGTGGAGCACAGGATAACGGCCTGGAATTTCCTTCAATCCCTAGCCAAGTAGCAGCTTCGGCCTCCATTGCATCAAGCAGTGGTCGATCAACTTCATTCAAATCACGGTTAGGAATCCTGTCTGGGAGGAGTTTAGTGGCTTGCACTTTGAGAAGGTGGTCAGGCGGTAACAGTAACTCCCGGAATGGTTA 1607 0.4792 MGQSASTAAIACRRESSHSHRSKTGSTALVSPMLADVNTESSNEGIDGGPDYISDLPDECLACIFQSLGSADRNRCSLVCRRWLRIEGQSRHRLSLNAQSDLLSVAPSLFSRFDSVTKLALKCDRRSMSIGDYALVLISERCPNLTRLKLRACRELTDVGMEGFAKNCKGLKKLSCGSCTFRAKGMNAVLDNCALEELSVKRLRGITDGAGAEPIGPGVAGSSLKTICLKELYNGQCFGSLILGSKNLRTLKLFRCSGDWDKLFQVMADQVTSMVEVHLERLQISDIGLTAISNCSSLEILHLVKTPECTDMGLISIAERCKLLRKLHIDGWKTNRIGDEGLTAVAKCCPNIQELVLIGVNPTTASLEMLASNCQNLERLALCGSDTVGDAEISCIASKCVALKKLCIKSCPVSDLGMEALAGGCPNLVKVKVKKCKSVTSEGADLLRLSRGSVAVNLDTGETEHHDASASDGGAQDNGLEFPSIPSQVAASASIASSSGRSTSFKSRLGILSGRSLVACTLRRWSGGNSNSRNG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00687 535 Gene3D - 52 91 - -
Bva10g00687 535 SMART fbox_2 56 96 IPR001810 GO:0005515
Bva10g00687 535 PANTHER F-BOX PROTEIN SKIP2 34 472 - -
Bva10g00687 535 Pfam F-box domain 53 86 IPR001810 GO:0005515
Bva10g00687 535 PANTHER UNCHARACTERIZED 34 472 - -
Bva10g00687 535 Pfam Leucine Rich repeat 142 165 IPR001611 GO:0005515
Bva10g00687 535 SUPERFAMILY F-box domain 46 86 IPR036047 GO:0005515
Bva10g00687 535 Gene3D Ribonuclease Inhibitor 94 458 IPR032675 -
Bva10g00687 535 ProSiteProfiles F-box domain profile. 50 86 IPR001810 GO:0005515
Bva10g00687 535 SMART LRR_CC_2 321 348 IPR006553 -
Bva10g00687 535 SMART LRR_CC_2 374 399 IPR006553 -
Bva10g00687 535 SMART LRR_CC_2 295 320 IPR006553 -
Bva10g00687 535 SMART LRR_CC_2 142 167 IPR006553 -
Bva10g00687 535 SMART LRR_CC_2 400 424 IPR006553 -
Bva10g00687 535 SMART LRR_CC_2 425 452 IPR006553 -
Bva10g00687 535 SMART LRR_CC_2 168 192 IPR006553 -
Bva10g00687 535 SUPERFAMILY RNI-like 98 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00687 Bva-Chr10 5765294 5767288 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00687 10 5765294 5767288 Bva10g00687 10 5765294 5767288 ECH