Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00685 ATGCCTCGCCATCATCATCAACAAGAATCTGAGTCAGAGGCACAAGAGAACCATAAATTCCTTCTGGATTCCCTCTACTGCTCGGAAGAGCATTGGGAGGAAGTGGGAGAAGATAATTGCCACCAAGAATTAGAACAAGTAGATCTATGTTACCAATATAGCAATAAAAGAAACTCGCCGACGTTAGTGATGCTAGAACAAGACCTATATTGGGATGATGAAGAGCTAACGACTCTGCTCGGCAAACAAGAGCAAAACCAACTTGATTCATGCCTCCGAACCAACCCACACTTGGCTGCGGCTCGCACAGAAGCCGTGGAGTGGATGCTGAAAGTGAATTCCCACTACTCTTTCTCTGCTCTCACTGCGCTTCTTGCCGTCAACTACTGGGACAGGTTCTTTTCCAGATTCCAGAATGGGAAGCCATGGATTACCCAACTCGCTGCCGTTGCGTGCCTTTCTCTAGCTGCCAAGGTGGAGGAGACCCAAGTGCCGCTTCTGCTAGAGCTCCAAGTGGAGGACAGTAAATACGTGTTCGAAGCCAAAATCGTTAAAAGAATGGAGATTTTGGTCCTTTCCACACTTGAATGGAAGATGAATCCTGTAACCCCAGTCTCATTTCTTGATTATATCACGAGAAGACTTGGCTTAAAGGATTATCTCTGCTGGGAGTTCCTCACGAGATGTGAGGCTATTCTTCTCTCCCTCGTTGCAGATTCCAGATTTATGTCTTATCTTCCTTCTGTGGTGGCAACTGCTACAATGATTCATGTTGTCAACAGATTGGAACCGCATCTAGGAGTTGAGTACCAAAATCAGCTTCTGGGCATCGTTGGAATCAAAAAGGACAAAGTGGATGAATGCTACAAGCTCGTTTTGGAATTGGTGTCGGGGCATGAGTATAACTACCACGGCATCTGCAATCAATCCAACAAACGCAAGTTTGTGTCTGTTCCTGGTAGCCCAAGTGGCGTAATGGATGGGTCATTCTCATTCAGCACTAGTGATAGCTCCAATGATTCTTGGTCGGTAGCTGCTTCTGTGTCGTCCTCACCGGAGCCTCTGGCCAAGAAGACAAGGTCTCAAGACCAGCTTCTACTAAACCATCCCAATTCAGATTTCCTCACCATTCCTCGCTA 1139 0.4662 MPRHHHQQESESEAQENHKFLLDSLYCSEEHWEEVGEDNCHQELEQVDLCYQYSNKRNSPTLVMLEQDLYWDDEELTTLLGKQEQNQLDSCLRTNPHLAAARTEAVEWMLKVNSHYSFSALTALLAVNYWDRFFSRFQNGKPWITQLAAVACLSLAAKVEETQVPLLLELQVEDSKYVFEAKIVKRMEILVLSTLEWKMNPVTPVSFLDYITRRLGLKDYLCWEFLTRCEAILLSLVADSRFMSYLPSVVATATMIHVVNRLEPHLGVEYQNQLLGIVGIKKDKVDECYKLVLELVSGHEYNYHGICNQSNKRKFVSVPGSPSGVMDGSFSFSTSDSSNDSWSVAASVSSSPEPLAKKTRSQDQLLLNHPNSDFLTIPR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00685 379 SMART cyclin_7 107 193 IPR013763 -
Bva10g00685 379 Pfam Cyclin, C-terminal domain 202 316 IPR004367 -
Bva10g00685 379 SUPERFAMILY Cyclin-like 71 200 IPR036915 -
Bva10g00685 379 Gene3D - 201 290 - -
Bva10g00685 379 SUPERFAMILY Cyclin-like 203 316 IPR036915 -
Bva10g00685 379 Gene3D - 98 200 - -
Bva10g00685 379 SMART Cyclin_C_2 202 324 IPR004367 -
Bva10g00685 379 Pfam Cyclin, N-terminal domain 92 200 IPR006671 -
Bva10g00685 379 PANTHER CYCLIN D3.1 PROTEIN 18 360 - -
Bva10g00685 379 CDD CYCLIN 102 192 IPR013763 -
Bva10g00685 379 PANTHER CYCLINS 18 360 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00685 Bva-Chr10 5752452 5754587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00685 7 295 Core Cell Cycle Gene Families AT4G34160 51.546 4.36e-100 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00685 10 5752452 5754587 Bva06g02120 06 14019081 14021032 BWGD
Bva10g00685 10 5752452 5754587 Bva08g00574 08 2957745 2959679 ECH
Bva10g00685 10 5752452 5754587 Bva11g01745 11 15642013 15643651 ECH
Bva10g00685 10 5752452 5754587 Bva13g00327 13 1534512 1536517 ECH
Bva10g00685 10 5752452 5754587 Bva14g00405 14 1995264 1997340 ECH
Bva10g00685 10 5752452 5754587 Bva10g00685 10 5752452 5754587 ECH