Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01524 ATGGACGGTGTAGTACTAGAAGACATAGATAACAGTGATAGACTTGCAACAGAAAATGTCCAGCAAATCCAGCCTGATAAGGGCCAGAGACAGAATGTAACTGTAAACTTAGCTGAAAGAGTAGTTAATCTGGATGGTGATGCAAATTTTAAACCACAAGTGGGCATGCTATTTGAATCAGAAGATGCCACAAAAACTTTTTATGATGCATATGCCAGGCATGAGGGTTTCAGCACCAATGTTGGTCAGTTCAGTCGTACTAAGCCTGATGGTCCAATTATAACTTGGGACTTTGCTTGTTCTATGGAGGTATTTAAGAGGAAGAATGTAGAAAGTTGCAATGCCATGCTTAGGGTAGAGAGAAGAGATGCAAACACATGGGTAGtgacaaaatttgttgaagaTCATAACCATTCACTGGCATCCCATAGTAAGGTGCACTATGTGCAATCCCGTAGGCATTTTGCTGGTGCTACAAGGAATGCTACTGAGACAATGAATGCCTTTACTGATGCTTATGTTTCCATGGATGGAAATAATGTATTTCATGAACCTAATTGTGTGGCCAGAAGTTCCTCTCCAGCAGACCGAAACCACACAGCCAGAAATATTGGGCCTTTTACCTATGTAAGACCTTCTGGAAAGAGAACCCTTGGAAGAGATGCtcaaaatcttttgaattattttaaaaagatgcAGGCAGAAAACCCTGGCTTCTATTATGCAATACAGCTCGATGATGGTAACCAGATGACTAATGTCTTCTGGGCTGATGCAAGGTCTAGAGCAGCTTATAATTACTTTGGTGATGCAGTAGTTTTTGACACAATGTATAGACCAAATCAATACCAAGTCCCATTTGCTCCCTTTACAGGTGTCAATCATCATGGTCAGCTGGTTTTATTTGGCTGCGCGTTACTTTTGGATGAATCTGAGTCTTCCTTTACATGGCTTTTCAGGACATGGCTATCTGCAATGAATGATCGACCACCTATTTCTTTAACCACAGACCAAGATCGAGCAATACAAGCAGCCATTGCCCAAGTCTTTCCAGGAACACGCCACTGTATTTGTAAGTGGCACATTTTAAGGGAAGGCCAAGAAAGATTGGCTCACATTTACCTTGCTCATCCTTCCTTTTATGGAGAGCTATATAGCTGCATCAGTTCCTCAGAAACCATTGAGGATTTTGAATCGTCTTGGCAATCCCTCTTGGATAAATACGATCTCCAGAAAAATGAGTGGCTTCAGTCAGTGTATAATGCTCGCCAACAGTGGGCACCTGTTTATTTTCGTGGAACTTTCTTTGCTTCACTTTCCTTAAACCATGGAGTTAGCTCCTTTTTTGATAGCTATGTGAATCAACGGACTACcataccttttttctttaagcaGTATGAAATAGCTCTGGAACATtctttggaaaaagaaatagaagcagATAATGATACAATTTGCATCACACCAGTGCTGAAGACTCCATCACCGATGGAAAAACAGGCTGCACATCTATACACCAAGAAGATTTTTGCAAAGTTTCAGGAGGAACTAGTGGAAACTTTTGTGTATACTGCAAATAATATTGAGGGCAATAGAGTGGTCAGTAAATACAGGGTTGTGAAATATGAACATGATCACAAGGCGTACATAGTCACTTTAGATCATTCTGAACTAAAAGCAAATTGTAGCTGTCAGATGTTTGAATACTCAGGCATTCTTTGTAGGCATATATTGACTGTCTTCACTGTTACAAATGTTCTTACCCTTCCATTGCATTACATTTTGAAGCGCTGGACAAGGAATGCGAAGTCCAGTACTGAACCAGATGAACACATTCCAGATGCACGCGGCATTGAAACTCTCACTGCGCGTTTCAATAGTTTATGTCGAGAATCCATCAAACTTGCTGAAGAAGGGGCAGTAGGTTTGGAGACATATAATGCAGCAATGAGTGCTTTAAAAGAGGCTGGGAAAAAGGTTGCTTTGgtgaagaaaaatgttgtAAAAGTCACACCTCAAAGCACTCGTGGGAATGGAAGTAGTCAGGAAGACAACTGCAAGAAGAGCCCTTCATTGAGTTCCACAGTGGCCCCATCATTATGGCCCTGGCAAGATTCAGTGCCACATCATTTTAATCTGAATGATATTGGGCTTCCTGTTGCTGATCTGAATCATCCCAGCATGGCTCCTGTTTCTATTCACCGTGATGGTGGGACTCCTGATAACACTGTTGTCCTTACTTGTTTTAAGGCTATGACTTGGGTCttagaaaataagaattcaaCCACGTCTGGTAAAGTTGCAGTCATCAAGttgaagCTGCAAGATTATGGCAAGAACCTCTCTGGAGAGAAAGAAGTGCAATTTAGGGTGACAAGGGTTACCTTGGAGCCAATGTTGAAATCTATGGCTTACATCAGTCAGCAGCTCTCTACACCAGTCAATAGAGTTGCTGTCATTAATCTGAAGCTCCAGGATGCAAAGACAACAACTGGGGAAACAGAAGTGAAATTTCAAGTTTCCAGAGATACACTAGGTTCCATGCTCAGATCTATGGCCTACATCAAGGAGCAGCTATG 2579 0.3998 MDGVVLEDIDNSDRLATENVQQIQPDKGQRQNVTVNLAERVVNLDGDANFKPQVGMLFESEDATKTFYDAYARHEGFSTNVGQFSRTKPDGPIITWDFACSMEVFKRKNVESCNAMLRVERRDANTWVVTKFVEDHNHSLASHSKVHYVQSRRHFAGATRNATETMNAFTDAYVSMDGNNVFHEPNCVARSSSPADRNHTARNIGPFTYVRPSGKRTLGRDAQNLLNYFKKMQAENPGFYYAIQLDDGNQMTNVFWADARSRAAYNYFGDAVVFDTMYRPNQYQVPFAPFTGVNHHGQLVLFGCALLLDESESSFTWLFRTWLSAMNDRPPISLTTDQDRAIQAAIAQVFPGTRHCICKWHILREGQERLAHIYLAHPSFYGELYSCISSSETIEDFESSWQSLLDKYDLQKNEWLQSVYNARQQWAPVYFRGTFFASLSLNHGVSSFFDSYVNQRTTIPFFFKQYEIALEHSLEKEIEADNDTICITPVLKTPSPMEKQAAHLYTKKIFAKFQEELVETFVYTANNIEGNRVVSKYRVVKYEHDHKAYIVTLDHSELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPLHYILKRWTRNAKSSTEPDEHIPDARGIETLTARFNSLCRESIKLAEEGAVGLETYNAAMSALKEAGKKVALVKKNVVKVTPQSTRGNGSSQEDNCKKSPSLSSTVAPSLWPWQDSVPHHFNLNDIGLPVADLNHPSMAPVSIHRDGGTPDNTVVLTCFKAMTWVLENKNSTTSGKVAVIKLKLQDYGKNLSGEKEVQFRVTRVTLEPMLKSMAYISQQLSTPVNRVAVINLKLQDAKTTTGETEVKFQVSRDTLGSMLRSMAYIKEQL 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01524 859 MobiDBLite consensus disorder prediction 672 691 - -
Bva09g01524 859 Pfam FAR1 DNA-binding domain 66 141 IPR004330 -
Bva09g01524 859 Pfam MULE transposase domain 272 364 IPR018289 -
Bva09g01524 859 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 41 803 - -
Bva09g01524 859 SMART 26again6 560 587 IPR006564 GO:0008270
Bva09g01524 859 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 803 IPR031052 GO:0006355
Bva09g01524 859 Pfam SWIM zinc finger 549 583 IPR007527 GO:0008270
Bva09g01524 859 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01524 Bva-Chr9 8850221 8856157 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva09g01524 MULE 4.9e-27 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01036 07 12015768 12022220 Bva09g01524 09 8850221 8856157 ECH
Bva09g01524 09 8850221 8856157 Bva09g01524 09 8850221 8856157 ECH