Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01402 ATGGAGGAGCCTGTACCGCCTGATGATTCTGATACAAAATATGTTGGAGCTGGAGGGTCATCTTGCCTTTATGATCTCTTTTGTTCTGAAACACCAAGTTTGGAGTCCCAACGAGAAGAATTGCTAACTTCTGGTCCACGAAAAAGGCTAGATAATCTGTTGCGTCAAGCTGGGAATAAGTTATGTGCTGATTGTGGAGCTCCAGATCCAAAATGGGTGTCTTCTAATCTAGGAGTATTTATCTGTATCAAGTGTTCTGGAGTACATAGAAGCATGGGAGTCCATATATCAAAGGTTCTATCAGCGAAGCTAGATGAGTGGACAGAGGAACAAGTCGATGAATTAGTGAAATTGGGTGGAAATACAGTAGTAAATAGGAAGTATGAAGCTTATATCCCAAGCAATATAAAGAAACCAAAACCTTCTTCCTCCAATGAGGAGCGATCTGATTTTATTAGGAGAAAGTATGAGCAGTTACAGTTTCTGCATTCTGATGAAAATATGTCATGTCCCTATCCACCatctcaagaaaaaaattctccacatgacAAGAAACATACAGATAAGTATGTAACCAGACATAGAATCGGGCATACATTTCGTAACAGCTGGGGAAGAAAAGATTCTGAGCGTAAGCCTACAAAGAAGAGCAATTCCTTGGCAGGTATGATTGAATTTGTTGGGTTGATTAAGGTTAATGTAGTCAAAGGCACCAACTTGGCCGTCCGCGATATGAAGAGTAGTGATCCTTATGTTCACCTTTCTCTGGGTCAGCAATCGGTAAGGACACGTGTCATAAAGAACAATTTGAATCCAGTCTGGAATGAAAGCTTAATGCTGTCAATTCCAGAGAACATTCCTCCTCTTAAAGTGATTGTGTATGACAAAGACACATTCTCAACTGATGATTTCATGGGTGAGGCTGAAATAGACATTCAACCCTTACTTCAAGCAGCAAAAGCATGCGAAACATCGTCAATCAGCGAGCCCATGCAGCTTGGATCTTGGGTTGCTTCCACAGACAACACCCTCGTTAAAGATGGCATCATCTCCCTAGAAGATGGGAAGGTCAGACAACTTATCTCTCTGAGGCTACAGAATGTTGAAAGAGGTGTTCTGGAAATTGAGCTTGAGTGTCTTCCTCTCACTCAATA 1154 0.4055 MEEPVPPDDSDTKYVGAGGSSCLYDLFCSETPSLESQREELLTSGPRKRLDNLLRQAGNKLCADCGAPDPKWVSSNLGVFICIKCSGVHRSMGVHISKVLSAKLDEWTEEQVDELVKLGGNTVVNRKYEAYIPSNIKKPKPSSSNEERSDFIRRKYEQLQFLHSDENMSCPYPPSQEKNSPHDKKHTDKYVTRHRIGHTFRNSWGRKDSERKPTKKSNSLAGMIEFVGLIKVNVVKGTNLAVRDMKSSDPYVHLSLGQQSVRTRVIKNNLNPVWNESLMLSIPENIPPLKVIVYDKDTFSTDDFMGEAEIDIQPLLQAAKACETSSISEPMQLGSWVASTDNTLVKDGIISLEDGKVRQLISLRLQNVERGVLEIELECLPLTQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01402 384 Gene3D C2 domain 227 382 IPR035892 -
Bva09g01402 384 PRINTS HIV Rev interacting protein signature 78 95 IPR001164 GO:0005096
Bva09g01402 384 PRINTS HIV Rev interacting protein signature 99 120 IPR001164 GO:0005096
Bva09g01402 384 PRINTS HIV Rev interacting protein signature 59 78 IPR001164 GO:0005096
Bva09g01402 384 SMART arf_gap_3 48 169 IPR001164 GO:0005096
Bva09g01402 384 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 227 322 IPR035892 -
Bva09g01402 384 Gene3D Arf GTPase activating protein 30 170 IPR038508 -
Bva09g01402 384 SMART C2_3c 229 324 IPR000008 -
Bva09g01402 384 SUPERFAMILY ArfGap/RecO-like zinc finger 47 163 IPR037278 -
Bva09g01402 384 Pfam Putative GTPase activating protein for Arf 48 163 IPR001164 GO:0005096
Bva09g01402 384 ProSiteProfiles C2 domain profile. 211 325 IPR000008 -
Bva09g01402 384 MobiDBLite consensus disorder prediction 166 187 - -
Bva09g01402 384 CDD ArfGap 50 156 - -
Bva09g01402 384 ProSiteProfiles ARF GTPase-activating proteins domain profile. 47 169 IPR001164 GO:0005096
Bva09g01402 384 Pfam C2 domain 229 321 IPR000008 -
Bva09g01402 384 CDD C2_ArfGAP 227 371 - -
Bva09g01402 384 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 9 384 IPR044518 GO:0005096|GO:0005543
Bva09g01402 384 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 9 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01402 Bva-Chr9 7793784 7800268 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01402 09 7793784 7800268 Bva07g01168 07 12844650 12850390 BWGD