Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01401 ATGGAGTCTTTGGTTCTTCAGCTCCATGAGATCTCAGCTGTTAAATTTGGCAACTTCAAGCTGAAATCTGGCATCTCCTCACCAATCTATATAGACCTTCGCCTTATTGTATCCTACCCTTCCTTGCTCCGGAAAATCTCCCAAACTCTAATTTCCTCACTCCCTTCTTCTGCTTCCTATGATGTTGTCTTTGGTGTCCCTTATACTGCTCTACCTGTTGCAACTTGTGTCTCTGTCACTAACAACATTCCTATGGTTATGCGCTGCAAGGAAATCAAAGACTATGGGACTGCTAAAGCAATTGAAGGTGATTTCAAGGATGGCCAAACTTGCTTAATCATTGAAGATCTAGTTACTAGTGGCACATCAGTTTTGGAAACTGCTGCACCACTGCAAGGTGCAGGGTTGAAGGTCAGTGATGCTGTTGTTTTGATCGATAGAGAGCAAGGAGGTAGAGAGAATTTGGAGGAGAATGGGATCAGGCTGCATGCAATTATTAAATTGACTGAAATAGTGAagattttgagagaaaaaggaaagcttAATGAGGAAATGGAAGGCACTGTGATGAAATTTTTAGAGGAGAATCGGAAGGTTGCTGCTTTGACAAAGGTGGAGAAGCCTGCAACTAAGGTCAAGGCTTTGTCATTTGGGGATAGGGCCAAGTTGTCCAAGAATCCAACTGGTAAGAAGTTGTTTGAGATAATGGTTCAGAAGGAGAGCAATCTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTATTTGAACTTGCAGAGAAGGTTGGACCTGAGATATGCTTGCTGAAAACTCATGTGGATATTTTTCCCGATTTCACTCCTGATTTCGGTGCCAGGCTTAGCTCGATTgcagaaaaatataactttttaatctttgaGGATCGCAAATTTGCTGACATTGGAAACACGGTGACTATGCAGTACGAAGGAGggatttttcatatattggAGTGGGCTGACATAGTGAACGCTCACATTATCTCCGGTCCTGGAATTGTTGATGGATTGAAATTAAAGGGTTTACCTCACGGTAGGGGTCTGTTGCTGCTTGCTGAAATGAGTTCAGCCGGTAACCTTGCCAAGGGAGATTACACAGCTGCAGCAGTGAAGATTGCTGAGGATCATTCTGATTTTGTCATTGGCATCATCTCTGTCAATCCAGCATCGTTGCCAGGGGCACCCGTAAATCCTTCTTTCGTTCAGGCAACTCCTGGAGTTCAAATGGTGACCGGTGGCGATGCTTTAGGACAGCAATATAACACTCCCCATTCTGTCATCCATGACAGGGGTAGCGACATTATAATCGTCGGCCGTGGCATTATAAAGGCAGTAAATCCGGCTGAGGCAGCTCTCCAATATCGGCTGCAAGGATGGAATGCATATTTGGCCAAGTGTTCTTG 1421 0.4272 MESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIVSYPSLLRKISQTLISSLPSSASYDVVFGVPYTALPVATCVSVTNNIPMVMRCKEIKDYGTAKAIEGDFKDGQTCLIIEDLVTSGTSVLETAAPLQGAGLKVSDAVVLIDREQGGRENLEENGIRLHAIIKLTEIVKILREKGKLNEEMEGTVMKFLEENRKVAALTKVEKPATKVKALSFGDRAKLSKNPTGKKLFEIMVQKESNLCLAADVGTAAELFELAEKVGPEICLLKTHVDIFPDFTPDFGARLSSIAEKYNFLIFEDRKFADIGNTVTMQYEGGIFHILEWADIVNAHIISGPGIVDGLKLKGLPHGRGLLLLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGIISVNPASLPGAPVNPSFVQATPGVQMVTGGDALGQQYNTPHSVIHDRGSDIIIVGRGIIKAVNPAEAALQYRLQGWNAYLAKCS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01401 473 SMART OMPdecase_2 242 460 IPR001754 GO:0004590|GO:0006207
Bva09g01401 473 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 1 473 - -
Bva09g01401 473 TIGRFAM pyrE: orotate phosphoribosyltransferase 8 171 IPR004467 GO:0004588
Bva09g01401 473 Gene3D Aldolase class I 211 473 IPR013785 -
Bva09g01401 473 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 226 IPR023031 GO:0004588|GO:0006221
Bva09g01401 473 SUPERFAMILY Ribulose-phoshate binding barrel 215 469 IPR011060 -
Bva09g01401 473 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 243 461 IPR014732 GO:0004590|GO:0044205
Bva09g01401 473 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 1 473 - -
Bva09g01401 473 Pfam Phosphoribosyl transferase domain 50 153 IPR000836 -
Bva09g01401 473 CDD PRTases_typeI 61 167 IPR000836 -
Bva09g01401 473 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 241 460 IPR001754 GO:0004590|GO:0006207
Bva09g01401 473 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 298 311 IPR018089 GO:0004590|GO:0006207
Bva09g01401 473 CDD OMP_decarboxylase_like 243 460 - -
Bva09g01401 473 Gene3D - 1 207 IPR029057 -
Bva09g01401 473 SUPERFAMILY PRTase-like 3 190 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01401 Bva-Chr9 7787326 7789624 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01401 09 7787326 7789624 Bva07g01171 07 12855530 12859177 BWGD
Bva09g01401 09 7787326 7789624 Bva09g01401 09 7787326 7789624 ECH