Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01284 ATGCGGAAACCTGATTTGATGGGAAAAGATCAGAAAATgaacaataacaacaacaacaacaatgtTAAGAGCAAGCTGAGGAAAGGGCTATGGTCACCTGAGGAAGACGAGAAGCTGATAAGGTACATGTTGACTAATGGACAAGGTTGTTGGAGTGACATTGCCAGGAATGCTGGCCTCCAAAGGTGTGGCAAGAGTTGTCGCCTTCGTTGGATTAATTACTTGAGGCCTGATCTCAAGCGTGGTGCATTTTCACCACAAGAGGAAGAACTCATCATTCATTTGCACTCCATTCTTGGCAACAGGTGGTCTCAGATTGCGGCACGGCTACCAGGAAGGACAGACaatgaaattaagaatttCTGGAATTCAACAttgaagaaaaggattaaaaaCAGCAATGCCTCCACAACATCACCAAACAACAGTGACTCATCAGAGCCTACTAGAGATGTTTTGGGAGGGATCATGCCTATTAATGAGCATGACCTCATGGCCATGTGCATGGATtcctcttcatcatcttcatcctcaTCCATGCAAGCCATGGTTTTTGCGAATCAACTCGATCCCTTTTCGATGTTGAATAATCGCTATGACATGGCCAATGCAGCAAGTTTCGCTGACATGTCTGCATGCTTATCCCAAGTTGGCATGGTTGATGGTCTTTATGGTGATTATGGGATGATAGAGCCTAATAAGATGGGGTTAGAAAGAGACCTCTCGCTTCCTCCACTAGAAAGTAGAAGCATTGAAGACAATGGAGCTCCAATTGATGTGAAAAGCCACAACAACCACATCAATAATAGTTGCTTCAATAACACTGATCAGATTCAGAATCACAACTCTAAAGTAGAGGACTTGTTTGGGTTTGGAAATCATGGGCAAGGAGAAAACTTCAGAATGGGAGAATGGGATTTTGAGGGTCTGATGCAAGATATATCCTCTTTCCCTTCCCTTGATTTCCAAgttcaata 977 0.4012 MRKPDLMGKDQKMNNNNNNNNVKSKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRIKNSNASTTSPNNSDSSEPTRDVLGGIMPINEHDLMAMCMDSSSSSSSSSMQAMVFANQLDPFSMLNNRYDMANAASFADMSACLSQVGMVDGLYGDYGMIEPNKMGLERDLSLPPLESRSIEDNGAPIDVKSHNNHINNSCFNNTDQIQNHNSKVEDLFGFGNHGQGENFRMGEWDFEGLMQDISSFPSLDFQVQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01284 325 PANTHER TRANSCRIPTION FACTOR MYB83 1 325 - -
Bva09g01284 325 Pfam Myb-like DNA-binding domain 81 125 IPR001005 -
Bva09g01284 325 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Bva09g01284 325 SMART sant 80 128 IPR001005 -
Bva09g01284 325 SMART sant 27 77 IPR001005 -
Bva09g01284 325 SUPERFAMILY Homeodomain-like 26 122 IPR009057 -
Bva09g01284 325 Gene3D - 82 152 - -
Bva09g01284 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 75 IPR017930 -
Bva09g01284 325 MobiDBLite consensus disorder prediction 1 24 - -
Bva09g01284 325 CDD SANT 83 126 IPR001005 -
Bva09g01284 325 MobiDBLite consensus disorder prediction 132 149 - -
Bva09g01284 325 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Bva09g01284 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Bva09g01284 325 CDD SANT 31 75 IPR001005 -
Bva09g01284 325 Gene3D - 25 81 - -
Bva09g01284 325 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Bva09g01284 325 MobiDBLite consensus disorder prediction 132 152 - -
Bva09g01284 325 PANTHER MYB DOMAIN PROTEIN 55 1 325 - -
Bva09g01284 325 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01284 Bva-Chr9 6951481 6953899 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva09g01284 Myb_DNA-binding 3.8e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01284 07 13600033 13602139 Bva09g01284 09 6951481 6953899 ECH
Bva09g01284 09 6951481 6953899 Bva09g01284 09 6951481 6953899 ECH