Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01163 ATGACGTTGGCCTTCGCAGCAAAACGCCTACGCTTGCCAAATGGATCCTGGAATCTCATTGCCCGCTCCTCACATTTGCTCTCAATGCAAGCCCCCATTCCTCCCCTCTTTCGCCAGATAAGTATGGCCGCCGAGAGTGTTGCTTCTCAGCTTACTAGTAGTGGTCTGTTGCGGACTCAGGGCCTTATTGGAGGGAAATGGGTTGATGCTTATGATGGGAAAACCCTGAAGGTTTATAATCCAGCAACCGGTGAACCTATAGTAGATATCCCATGTATGGCCGGAAAAGAGACAAATGATGCAATATCTGCAGCTTATGATGCATATAGATCTTGGTGCAAAACCACTGCTTCTGAGAGGAGCAAACTTCTGAGGAAATGGTATGATTTGCTAATGGCACATAAAGAAGAGCTTGCACAACTTATAACTTTGGAGCAAGGAAAACCTCTAAACGAATCCATGGGTGAGATTAACTATGGGGCTGGTTTTATTGAGTTTTCAGCAGAGGAGGCAAAACGTGTATATGGTGATATAATTCCTGCACCTCTATCTGATCGACGCTTATTTGTCTTAAAGCAGCCTGTAGGGGTTGTTGGTGCAATCGCACCTTGGAACTTTCCCTTGGCTATGATTACCCGAAAGGTTGGCCCAGCTCTTGCATGCGGATGTACAGTGGTCATAAAACCCTCTGAACTTACTCCATTAACGGCTCTGGCTGCAGCAGAACTCTCTATTCGAGCTGGAATACCAGCGGGCGTTGTGAATGTTGTTATGGGAAATGCGCCAGATATTGGAGACGCTTTGATTGCAAGTCCACAGGTACGAAAGATCACATTCACAGGTTCAACAGCTGTTGGAAAGAAGTTGATGGCAGGTTCTGCTGGGACAGTTAAAAAAGTATCTCTAGAACTTGGTGGCAATGCACCTTGCATAATATTTGATGATGCTGACTTGGATGTGGCAATAAAGGGAACTGTTGGAGCAAAGTTCCGTAATAGTGGACAAACATGTGTTTGTGCCAATAGAATTCTTGTGCAAGAAGGTATCTATGAGAAATTTGCAAATGCTTTGGTCAAAGCTgttcaaaatatgaaagttgGGGATGGCTTTAATGAAGATGTGGTTCAGGGCCCTCTAATCAATGAAGCTTCCGTAAAAAAGGTTGATTCTTTGATTCAAGATGCTACTTCAAagGGGGCAAAACTGATTCTTGGGGGTCAAAGACATAGCCTTGGATTAACTTTTTATGAACCAACAGTTATCACTGATGTCAAAAACGAGATGCGCATATCAAGGGAAGAAGTATTTGGACCTGTTGCACCCCTCTTGCGGTTCAAAACTGAGGAGGAAGCTATCAGGATAGCTAATGACACCAATGCAGGGTTGggttcatatatatttacaaatagCGCCCAACGCTCATGGCGTGTTGCTGAGGCTCTTGAATATGGACTTGTGGGTGTGAATGAAGGCCTAATTTCAACAGAGGTGGCTCCATTTGGAGGTTTTAAACAATCTGGCCTCGGAAGAGAAGGGTCCAAATATGGAATGGATGAATATTTGGAAATCAAGTATGTTTGCTTGGGAAACATGAACAAAGAGTA 1604 0.4327 MTLAFAAKRLRLPNGSWNLIARSSHLLSMQAPIPPLFRQISMAAESVASQLTSSGLLRTQGLIGGKWVDAYDGKTLKVYNPATGEPIVDIPCMAGKETNDAISAAYDAYRSWCKTTASERSKLLRKWYDLLMAHKEELAQLITLEQGKPLNESMGEINYGAGFIEFSAEEAKRVYGDIIPAPLSDRRLFVLKQPVGVVGAIAPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIRAGIPAGVVNVVMGNAPDIGDALIASPQVRKITFTGSTAVGKKLMAGSAGTVKKVSLELGGNAPCIIFDDADLDVAIKGTVGAKFRNSGQTCVCANRILVQEGIYEKFANALVKAVQNMKVGDGFNEDVVQGPLINEASVKKVDSLIQDATSKGAKLILGGQRHSLGLTFYEPTVITDVKNEMRISREEVFGPVAPLLRFKTEEEAIRIANDTNAGLGSYIFTNSAQRSWRVAEALEYGLVGVNEGLISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMNKE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01163 534 Pfam Aldehyde dehydrogenase family 67 526 IPR015590 GO:0016491
Bva09g01163 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
Bva09g01163 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Bva09g01163 534 CDD ALDH_F5_SSADH_GabD 78 528 - -
Bva09g01163 534 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 78 524 IPR010102 GO:0009013|GO:0009450
Bva09g01163 534 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 54 531 - -
Bva09g01163 534 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 54 531 - -
Bva09g01163 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Bva09g01163 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 520 IPR016162 GO:0016491
Bva09g01163 534 SUPERFAMILY ALDH-like 53 532 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01163 Bva-Chr9 6195093 6204361 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01163 09 6195093 6204361 Bva09g01163 09 6195093 6204361 ECH