Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01138 ATGGAAAAGCTTACACGTGCCTCGCTTGGCACGTTCTCACCTCATTGCTCAAGCTTTTCCGTTTCTGATCTTCGATTCATCCTAAAACCCTGTACTGTAATGGCGACAAAGAGGAGCGTGAGCACCTTGAAGGAGGCTGATCTGAAGGGAAAGAGGGTGTTTGTGAGGGTTGATCTGAACGTACCTTTAGATGAGAACTTTAATATCACCGATGATACCAGAGTCCGTGCAGCTGTGCCTACTATTAAGTACTTGATCGGTTATGGTGCCAAAGTCATCCTCTCCAGTCACCTGGGACGTCCAAAGGGTGTAACACCTAAATACAGTTTGAAACCCCTTGTACCAAGGTTGTCTGAACTTCTTGGAGTTGAGGTTAAGATAGCAAATGACTGTATTGGAGAGGAAGTTGAGAAATTGGTTGCTCAACTTCCAGAAGGTGGTGTCTTGCTCCTTGAGAATGTGAGATTCTACaaggaggaagagaagaatGACCCTGAATTTGCAAAGAAGCTTGCTTCTCTGGCTGATCTTTATGTCAATGATGCATTTGGCACTGCCCACAGAGCACATGCTTCTACAGAAGGAGTGACTAAATATTTGAAGCCTGCTGTTGCTGGATTCCTCATGCAGAAGGAGCTTGACTATCTAATTGGAGCTGTTGCAAACCCCAAGATACCATTTGCAGCTATTGTGGGTGGGTCAAAGGTTTCTACCAAAATTGGAGTTTTAGAATCTTTGTTGGAGAAGGTTAATGTTCTGTTGCTTGGTGGAGGGATGATCTTTACATTTTACAAGGCTCAAGGTCATTCAGTTGGATCATCTCTTGTTGAGGAAGACTTGCTTAATACTGCTTCTCAACTTATAGAAAAAGCTAAGGCTAAGGGAGTTACTCTTTTGCTTCCAATTGATGTGGTCATAGCTGACAAGTTTGCTGCTGATGCTAACAGCAAGGTTGTGCCAGCATCAGGTATCCCAGATGGATGGATGGGATTGGATATTGGACCTGATTCCGTCAAGACATTTAGTGAAGCTTTGGATAAGACTCAGACCATCATTTGGAATGGACCAATGGGTGTTTTTGAGTTTGATAAATTCGCAGCAGGAACAGATGCTATAGCCAAGAAATTGGCAGAGCTGAGCGGCAAGGGTGTGACTACCATCATTGGTGGAGGTGACTCGGTCGCTGCCGTAGAGAAGGCTGGCCTTGCCGACAAGATGAGCCACATCTCTACTGGTGGTGGTGCCAGCTTAGAGCTTCTGGAGGGAAAGTCACTCCCTGGAGTCCTTGCTCTTGATGATGCTTG 1304 0.4479 MEKLTRASLGTFSPHCSSFSVSDLRFILKPCTVMATKRSVSTLKEADLKGKRVFVRVDLNVPLDENFNITDDTRVRAAVPTIKYLIGYGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDCIGEEVEKLVAQLPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPAVAGFLMQKELDYLIGAVANPKIPFAAIVGGSKVSTKIGVLESLLEKVNVLLLGGGMIFTFYKAQGHSVGSSLVEEDLLNTASQLIEKAKAKGVTLLLPIDVVIADKFAADANSKVVPASGIPDGWMGLDIGPDSVKTFSEALDKTQTIIWNGPMGVFEFDKFAAGTDAIAKKLAELSGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKSLPGVLALDDA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01138 434 PANTHER PHOSPHOGLYCERATE KINASE, CYTOSOLIC 34 434 - -
Bva09g01138 434 Gene3D - 220 433 IPR015824 GO:0004618|GO:0006096
Bva09g01138 434 SUPERFAMILY Phosphoglycerate kinase 41 433 IPR036043 GO:0004618|GO:0006096
Bva09g01138 434 CDD Phosphoglycerate_kinase 43 433 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PIRSF Pgk 35 434 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 Pfam Phosphoglycerate kinase 44 423 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 Hamap Phosphoglycerate kinase [pgk]. 42 433 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PANTHER PHOSPHOGLYCERATE KINASE 34 434 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 ProSitePatterns Phosphoglycerate kinase signature. 52 62 IPR015911 GO:0004618|GO:0006096
Bva09g01138 434 Gene3D - 40 217 IPR015824 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 69 91 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 205 227 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 146 161 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 47 63 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 174 196 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 228 247 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 350 375 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 386 397 IPR001576 GO:0004618|GO:0006096
Bva09g01138 434 PRINTS Phosphoglycerate kinase family signature 409 426 IPR001576 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01138 Bva-Chr9 5970250 5973542 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01138 09 5970250 5973542 Bva09g01138 09 5970250 5973542 ECH