Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva09g01122 | ATGGCTTCTAATATTTTGACAAGGACACTATTCTCTACTAGATTGCTTCGATCCTCGTCTTTTCTCACTCAAAAGCCTCAGCTTTccaattctttcttcaatAGGCGATCAATATGTTTACAAGCTGGCGCAGTCTATATTGCTCAAAAAGCTAAAGCAGTTCATTGGACTCCTTGTGCTATGGCATCTGCATCAATTGGTACAAGAGCTGCATATTCTACACAATCTATTTCTACAAATGAGCCAGTTGTTTCTGTGGATTGGCTCCATGCTAACCTGAAGCAGCCTGATTTGAAGGTGCTTGATGCATCTTGGTACATGCCAGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCAGGAGCCCTTTTCTTTGACGTAGATGGCATATCCGATCGAACTACAAAATTGCCACACATGTTGCCATCAGAGGAAGCTTTTGCTGGTGCTTGTTCTGCTCTTGGCCTAGAGAATAAAGATGGGCTGGTTGTATATGATGGTAAAGGACTATTTAGTGCAGCTCGTGTCTGGTGGATGTTCCGAGTATTTGGCCATGATAGAATTTGGGTTTTAGATGGTGGCCTCCCAAGGTGGCGTGCATCAGGATATGATGTTGAATCTAGTGCCTCTGGTGATGCTATTTTAAAAGCCAGTGCAGCAAGTGAGGCCATCGAGAAAGTATATCATGGACAGTCAGTCAGCCCTATCACATTTCATACTAAATTTCAGCCACATCTTGTTTGGACACTTGAGCAGgTAAAGGGAAATATCGAGGAAAAAACTCACCAACACATAGATGCTCGATCAAAGCCCAGATTTGATGGAGCTGTACCAGAACCCCGAAAGGGAATTAGAAGTGGTCATGTACCTGGCAGCAAGTGCATTCCTTTTGCACAGCTTTTGGATGCTTCACAGACATTGTTACCGGCAGATGAGCTGAAGAAGCGTTTTGAACAAGAAGGCATCTCTTTGGAGAGCCCATTGGTGACTTCATGTGGCACTGGGGTAACTGCTTGCATTCTTGCACTGGGTCTCCACCGGCTTGGAAAATCTGATGTTGCTGTCTATGATGGATCTTGGACTGAATGGGGAGGACACCCTGAAACACCTGTTGAAACTTCATA | 1136 | 0.4375 | MASNILTRTLFSTRLLRSSSFLTQKPQLSNSFFNRRSICLQAGAVYIAQKAKAVHWTPCAMASASIGTRAAYSTQSISTNEPVVSVDWLHANLKQPDLKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGISDRTTKLPHMLPSEEAFAGACSALGLENKDGLVVYDGKGLFSAARVWWMFRVFGHDRIWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYHGQSVSPITFHTKFQPHLVWTLEQVKGNIEEKTHQHIDARSKPRFDGAVPEPRKGIRSGHVPGSKCIPFAQLLDASQTLLPADELKKRFEQEGISLESPLVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTEWGGHPETPVETS | 378 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva09g01122 | 378 | Gene3D | - | 76 | 217 | IPR036873 | - | |
| Bva09g01122 | 378 | PANTHER | THIOSULFATE SULFERTANSFERASE | 75 | 377 | IPR045078 | GO:0016783 | |
| Bva09g01122 | 378 | CDD | TST_Repeat_2 | 253 | 368 | - | - | |
| Bva09g01122 | 378 | Pfam | Rhodanese-like domain | 85 | 204 | IPR001763 | - | |
| Bva09g01122 | 378 | Pfam | Rhodanese-like domain | 254 | 368 | IPR001763 | - | |
| Bva09g01122 | 378 | ProSiteProfiles | Rhodanese domain profile. | 94 | 211 | IPR001763 | - | |
| Bva09g01122 | 378 | SMART | rhod_4 | 252 | 373 | IPR001763 | - | |
| Bva09g01122 | 378 | SMART | rhod_4 | 84 | 208 | IPR001763 | - | |
| Bva09g01122 | 378 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 81 | 212 | IPR036873 | - | |
| Bva09g01122 | 378 | MobiDBLite | consensus disorder prediction | 265 | 285 | - | - | |
| Bva09g01122 | 378 | ProSiteProfiles | Rhodanese domain profile. | 262 | 376 | IPR001763 | - | |
| Bva09g01122 | 378 | CDD | TST_Repeat_1 | 83 | 206 | - | - | |
| Bva09g01122 | 378 | PANTHER | BNAC02G25610D PROTEIN | 75 | 377 | - | - | |
| Bva09g01122 | 378 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 255 | 377 | IPR036873 | - | |
| Bva09g01122 | 378 | ProSitePatterns | Rhodanese signature 1. | 118 | 129 | IPR001307 | GO:0004792 | |
| Bva09g01122 | 378 | MobiDBLite | consensus disorder prediction | 265 | 289 | - | - | |
| Bva09g01122 | 378 | ProSitePatterns | Rhodanese C-terminal signature. | 357 | 367 | IPR001307 | GO:0004792 | |
| Bva09g01122 | 378 | Gene3D | - | 248 | 375 | IPR036873 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva09g01122 | Bva-Chr9 | 5880339 | 5886141 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva09g01122 | 09 | 5880339 | 5886141 | Bva09g01122 | 09 | 5880339 | 5886141 | ECH |