Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01063 ATGGCAACACTGCTGAATTCGGTTTCTCCTGctgcaaatttattttcaagcaCAAAACTAAAGGGTTATAGATTCTATTCCCAGATTCCGAGTGTTTATACCTTTTCCCTCAAAAAGGATTTCTCTAGAGTTTTGGCATCTGCCCAGATCACTATTTCTCCGAAACATGCTGTTTTTACTCTCCCTAACTGGAGGAATGGGAGGCAAGACCAGAACAGTAAGGATCTCAGACTTAGTGATGCATTTCTTCACATGGAGTATATGGTGAACAAAGGCCACAAGCCTGATGTAAATCAGGCAACTCAGCTCTTGTATGATCTTTGCAAGTCGAATAAAACAAGGAGAGCTGTTAAAGTTATGGAGATGATGGTATCCTCCGGGATTATACCTGATGCAGCTTCCTATACATACTTGGTCAACTATTTGTGCAAGAAAGGCAATGTTGGGCTTGGGTTTGCGATGCAGCTGGTTGAGAAGGTGGAGCAACATGGTTTTCCAACAAACACTGTTACCTATAATACGCTTGTTAAAGGGCTTTGCATGCACGGGAACTTGAATCAGAGTTTGCAACTTTTAGACCGACTGACGAAGAAGGGGATGGTTCCAAATGCATTCACGTattcttttttacttgaaGCTGCTTATAAGGAAAGGGGAGTGGATGAAGCCAAGAGACTTTTAGATGAGATTATTGCCAAGGGTGGAGAGCCTAATTTAGTTAGTTACAATGTTTTGTTAACAGGGTTATGCAAGGAAAATAGGACTGAGGAAGCCATTCAGCTTTTCAGGGAATTGCCAGCAAAGGGGTTCAATCCTAGTGTTGtgagttataatattttgctGAGGAGTTTGGGCGATGAAGGGCGGTGGGAGGAGGCAAATGAGCTTTTAGCAGAGATGGATAGAAAAGATTGCCCCCCGTCTATAGTTACCTACAACATATTAATTACTTCTCTCGCCCTCCATGGAAGAACTGAACATGCTTTCAAGGTTATAGATGAAATGACAAGGAATGGATTTGAGGTGACTGCCACTAGCTATAATCCAATTATTGCCCATCTCTGCAAGGAAGGTAAGGTAGATCTTTTAGTTCAATGTCTAGAGCGAATGAAGTATCGGCGTTGTACTCCTAATGAAGGAACATATAATGCTATTGCTGTGCTTTGTGAGGAGGGGAAGGCTCAAGAggcattttttataattcaaagcTTAGGTAACAAACAGAACTCCTCTATACGTGACTTCTTCAAGATTGTGATTTCTACCTTGTGTAAGAGAGGGAACACATATCCAGCCTTTCAGTTATTATATGAAATGACAAAGTATGGATTTACTCCAGATTCTTATACTTATTCAGTCTTGATCAGAGGAATGTGTAGGGAGGGGATGTTAGATGAGGCTCTTGAGATATTCAAGgttttggaagaaaatggGTACAAGCCAAATACTGATAACTACAATGCACTTATACTTGGTTTTTGCAAATCCTGTAGAACAGATATGGCGCTGGAGGTATTTCAGATTATGATTAATAAAGGCTGTATGCCTACTGAGGTAACATATACCATTCTTGTGGAAGGGCTTGCTTTTGAAGATGAAATGGATATGGCGGCCAAGCTCATGAAAGAGTTGTATTTGAAAGAGGTCCTGAGCCAAAGTACTGTTGAAAGACTTGCTTTGCAATATGATTTCAAGGAATTCACAGGATA 1709 0.3909 MATLLNSVSPAANLFSSTKLKGYRFYSQIPSVYTFSLKKDFSRVLASAQITISPKHAVFTLPNWRNGRQDQNSKDLRLSDAFLHMEYMVNKGHKPDVNQATQLLYDLCKSNKTRRAVKVMEMMVSSGIIPDAASYTYLVNYLCKKGNVGLGFAMQLVEKVEQHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGMVPNAFTYSFLLEAAYKERGVDEAKRLLDEIIAKGGEPNLVSYNVLLTGLCKENRTEEAIQLFRELPAKGFNPSVVSYNILLRSLGDEGRWEEANELLAEMDRKDCPPSIVTYNILITSLALHGRTEHAFKVIDEMTRNGFEVTATSYNPIIAHLCKEGKVDLLVQCLERMKYRRCTPNEGTYNAIAVLCEEGKAQEAFFIIQSLGNKQNSSIRDFFKIVISTLCKRGNTYPAFQLLYEMTKYGFTPDSYTYSVLIRGMCREGMLDEALEIFKVLEENGYKPNTDNYNALILGFCKSCRTDMALEVFQIMINKGCMPTEVTYTILVEGLAFEDEMDMAAKLMKELYLKEVLSQSTVERLALQYDFKEFTG 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 273 307 IPR002885 -
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 96 130 IPR002885 -
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 482 516 IPR002885 -
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 447 481 IPR002885 -
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 343 377 IPR002885 -
Bva09g01063 569 Pfam PPR repeat family 168 213 IPR002885 -
Bva09g01063 569 Pfam PPR repeat family 272 320 IPR002885 -
Bva09g01063 569 Pfam PPR repeat family 481 529 IPR002885 -
Bva09g01063 569 Pfam PPR repeat family 418 460 IPR002885 -
Bva09g01063 569 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 567 - -
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 238 272 IPR002885 -
Bva09g01063 569 Pfam Pentatricopeptide repeat domain 330 389 IPR002885 -
Bva09g01063 569 Pfam Pentatricopeptide repeat domain 87 141 IPR002885 -
Bva09g01063 569 Gene3D Tetratricopeptide repeat domain 197 266 IPR011990 GO:0005515
Bva09g01063 569 Gene3D Tetratricopeptide repeat domain 267 336 IPR011990 GO:0005515
Bva09g01063 569 Gene3D Tetratricopeptide repeat domain 475 547 IPR011990 GO:0005515
Bva09g01063 569 Gene3D Tetratricopeptide repeat domain 337 409 IPR011990 GO:0005515
Bva09g01063 569 Gene3D Tetratricopeptide repeat domain 413 474 IPR011990 GO:0005515
Bva09g01063 569 Gene3D Tetratricopeptide repeat domain 38 196 IPR011990 GO:0005515
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 308 342 IPR002885 -
Bva09g01063 569 Pfam PPR repeat 233 264 IPR002885 -
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 168 202 IPR002885 -
Bva09g01063 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 203 237 IPR002885 -
Bva09g01063 569 SUPERFAMILY HCP-like 148 312 - -
Bva09g01063 569 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 567 - -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 417 448 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 310 343 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 170 204 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 346 379 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 449 483 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 486 517 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 240 273 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 107 132 IPR002885 -
Bva09g01063 569 TIGRFAM PPR: pentatricopeptide repeat domain 275 308 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01063 114 562 Glycosyltransferase AT1G05670 25.333 1.58e-45 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01063 09 5449210 5451572 Bva09g01063 09 5449210 5451572 ECH