Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01060 ATGGATTTAGTCTTCTCTCTAAAACCACATAACGTTCATCTGAAAGCACCCTCTTCCGTCTTCTTATCTTTTCCTGTGAATTTCCACCCATGTCGTCCGCGTTTCACTTCTCAAGCAGCTGCAAAGCATGTCAGGATTAAGTGTGAGCTGGATGGCAAAGTGAATGGTGCTCTTTCTGGCGATTTAGACCCACGTTTCCTTGACCGGCAAAAAGCACTGGAAGCAGCAATGAATGACATAAATAGCACATTTGGAAAGGGAAGTGTTACGAGGTTGGGCAGTGCTGGTGGAGCCTTGGTTGAAACATTTCCCAGTGGCTGTTTGACTCTAGACTGTGCTTTAGGCGGTGGCCTTCCAAAAGGAAGAATTGTAGAGATATATGGACCAGAAAGCAGTGGGAAGACCACTCTAGCACTTCATGCAATTGCGGAAGTGCAGAAGTTAGGAGGCAATGCTGTGCTTGTTGATGCTGAGCATGCTTTTGATCCAGCGTATTCTAAAGCATTAGGAGTGGATGTAGAAAATTTGTATGTCTGCCAGCCTGATCATGGAGAGATGGCTCTTGAAGTTGCAGATCGTATGTGTAGATCTGGTGCCGTAGATCTCATTTGTATAGACTCTGTCTCTGCTCTCACTCCACGAGCTGAAATTGAAggTGAGATTGGAATGCAGCAAATGGGTTTGCAAGCTCGTCTTATGAGCCAAGCATTGCGTAAGATGTCTGGAAATGCCTCCAAAGCTGGTTgcactcttatatttttaaatcaaataagataTAAGATTGGTGTCTATTATGGAAATCCAGAAGTCACAAGTGGTGGAATTGCGTTGAAATTCTTTGCTTCTGTTCGGCTCGAAATACGTTCTACTGGGAAGATAAAGTCTGTTAAAGGGGATGAAGAAATTGGCCTTAGAGTTCGTGTAAGAGTGCAAAAGAGTAAGGTATCAAGGCCCTACAAACAGGCGGAATTCGATATTATATTTGGAGAGGGAGTCAATAAACTGGGTTGCATTTTGGATTGTGCAGAAATAATGGATATTGTTTCAAAGAAGGGCTCTTGGTACAGCTATGGGGAGCATCGGTTGGGACAGGGAAGGGACAAGGCATTACAGTACTTGAGGGAGAATTCACATCTTTTGGAAGAAATTGAGAAGGCAGTTAGGTGTTCTTTGGCAGATGGAACTGGCCAAACAGGCTTCGGATACGCGAAGAACACACTGTCGTCCCTTCAAGATGAGGATGTGTTTGAGGAAATTCAATG 1262 0.4334 MDLVFSLKPHNVHLKAPSSVFLSFPVNFHPCRPRFTSQAAAKHVRIKCELDGKVNGALSGDLDPRFLDRQKALEAAMNDINSTFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAVLVDAEHAFDPAYSKALGVDVENLYVCQPDHGEMALEVADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEEIGLRVRVRVQKSKVSRPYKQAEFDIIFGEGVNKLGCILDCAEIMDIVSKKGSWYSYGEHRLGQGRDKALQYLRENSHLLEEIEKAVRCSLADGTGQTGFGYAKNTLSSLQDEDVFEEIQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01060 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 332 IPR027417 -
Bva09g01060 420 ProSiteProfiles RecA family profile 1. 99 257 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Bva09g01060 420 ProSiteProfiles RecA family profile 2. 262 337 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Bva09g01060 420 ProSitePatterns recA signature. 276 284 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Bva09g01060 420 TIGRFAM tigrfam_recA: protein RecA 68 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 Gene3D - 91 332 IPR027417 -
Bva09g01060 420 SUPERFAMILY RecA protein, C-terminal domain 334 388 IPR023400 -
Bva09g01060 420 Gene3D - 335 391 - -
Bva09g01060 420 Pfam recA bacterial DNA recombination protein 71 333 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 CDD recA 68 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 PRINTS RecA protein signature 273 301 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 PRINTS RecA protein signature 156 185 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 PRINTS RecA protein signature 308 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 PRINTS RecA protein signature 228 257 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 PRINTS RecA protein signature 362 379 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 PRINTS RecA protein signature 190 219 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 66 405 - -
Bva09g01060 420 PANTHER RECA 66 405 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 Hamap Protein RecA [recA]. 69 394 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva09g01060 420 SMART AAA_5 120 291 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01060 Bva-Chr9 5422575 5427923 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01060 09 5422575 5427923 Bva09g01060 09 5422575 5427923 ECH