Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01053 ATGCTCATATTAGGAGGTAATGTGCAAGGAGCAATGACTTCTCTGGCTTCCCCCGTGAGTTTGGGAAGTCTAGTAGGTGTGAGCTCATCTGCAAGGTCTCACTCTTTTGTGAGGAGAAGAGTATCATTTTGTAGAGGAAACTTAATAAGTAGAAAGAGATGGCATTGTGTCTCCTTgtcaatttgtaaatattcaGTGACTACAACTGATTTTATTGCTGACCAAGGCCATGCAGTTTCCCTTGATTCTAATAACAATAGTGGAAATAAAGGTGGAGATGGTGATGCTGGTTTTCTACTTAAGCCTCCTCCCAAGCCTATATTAAAGTCCTCAGAGACAAAGGGTAACTCTGGCATGAAATCTGAGGCTTGGGCCCCTTCAGAAGTGAGTGAGGATTCCGATGATGAAAAGTTAGATGATGtagaagagaggaaaaaagtaATTGAGTCACTTGGTGACGTATTGGAAAAGGCTGAGAAACTGGAAAAATCTAGCTTggataataaaagaaataatgtgGCTGTAAACAAGCCAATGGTATCTAACGCAACTGTTAATCCTAGGACTGGTAGACCTGTAAATTCAACTGAAAACCGGAAGACTAAAACCATGAAGAGTGTTTGGCGTAAAGGGGACACAGTTGCAAATGTGCAGAAGGTTATAAAGGTAGTGCCCAAGCATGATATTACAAATGAAGGAAAGAAGTCTCAAACGGGAGATGGGGAAAAGGGAACTTCACAGTCTCGTGCTCATCTTAGAGCTCCTCAGTCACCTTCAAGACCTCAACCTATGTTACAAGGTAAACCTTCAATAGCTCCCCCACCCGTCAAAAAACCTGTTGTCTTGAAGGATAAGGGTGCAGTTGACATACCTGGTAAGACTAAACAGAGAAAGCCAATATTGATCGACAAGTTTGCTGGCAAGAAACCAGTTGTTGATCCTTTAATTGCTCAAGCAGTTCTAGCTCCTCCAAAACCTGGAAAGGGTCCTCCACCTGGAAAATTTAGAGATGAGCGCCGGAAAAAAGGCGCTTCAGCTGGAGGAGGACCAAGAAGACGCATTATAGATGATGACGATATTCCGGATGAGGATGCATCAGAACTGAATGTCTCTATTCCTGGTGCTGCAACAGCAAGGAAAGGGAGAAAATGGAGTAAAGCAAGCCGAAAGGCAGCAAGACTCCAGGCTGCCAAGGATGCAGCTCCTGTCAAAGTGGAAATTCTAGAGGTCAGTGATAAAGGTATGCTGATAGAGGAGTTAGCCTACAACTTGGCAGTCAGTGAAGGTGAAATCCTGGGTTATTTATACTCCAAGGGAATTAAACCAGATGGAGTGCAAACATTGGACCAAAATATGGTGAAGATGATCTGTAAGCAATATAACGTGGAAGTCATAGATACTGATCCTgtcaaatttgaaaagttgGTGAAGAAAAGGGAAATTCTTGATGAAGTTGATCTTGACAAACTCAAAGATAGGCCTCCTGTCATTACTATCATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGATTATATTCGGAAGACCAAGGTAGCTGCTTCAGAAGCTGGTGGGATTACACAAGGCATTGGAGCATATAAGGTGCAAGTACCTGTTGACGGAAAACTTCTTCCTTGTGTTTTTCTTGATACTCCTGGTCATGAGGCATTTGGGGCAATGAGAGCTCGTGGAGCAAGTGTGACAGACATTGCTATCATTGTTGTAGCTGCTGATGATGGAATTCGGCCCCAAACAAATGAAGCCATAGCCCACGCCAAAGCAGCAGGAGTACCTCTAATTATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGAACGAGTCATGCAAGAGCTATCTATCATTGGTCTAATGCCAGAAGACTGGGGTGGTAACATCCCAATGGTTCAGATTAGTGCTCTTAGAGGGGAAAATATAGATGATCTTTTGGAAACCGTTATGCTTGTGGCTGAGTTGCAAGAGCTGAAAGCTAATCCCGACAGAACTGCAAAGGGGACAGTGATTGAGGCAGGTCTTGATAAATCAAAGGGGCCATTTGCTACATTTATTGTGCAGAATGGCACCCTTAAAAGAGGAGATATTGTAGTTTGTGGGGAAGCCTTTGGAAAGGTGAGAGCTTTATTTGATGATGGTGGAAAACGTGTTGATGCAGCTACACCCTCTATACCAGTACAGGTTATTGGATTGAACAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGATTCACTTGATGCTGCACGTGAAAAGGCGGAGGCCCGTGCTGAATTTTTACGAAGTGAGCGTATTTCAGCCAAGGCAGGGGATGGCAGGGTCACCCTTTCTTCTTTAGCTTCTGCGGTTTCAGCAGGAAAGCTTGCAGGGCTAGACTTGCACCAACTAAATATTATCTTGAAGGTTGATCTTCAGGGATCCATAGAAGCTGTCAGACAAGCACTACAAGTGCTTCCACAGGATAATGTCACTTTGAAGTTCCTGTTGGCAGCAACAGGTGATGTAAGCACCAGTGATATTGACCTTGCAGTTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAGAGCACCAGGCCCTGTGAAAAGTTATGCAGAGAATAAAGGTGTGGAAATTAGGttatataaagttatttacGAACTAATTGATGATGTGCGAAAAGCAATGGAAGGACTCCTAGAGCCTGTTGAGGAACAAGTAACAATTGGCTCAGCAGAAGTACGGGCTACTTTCAGCAGTGGTAGCGGTCGTGTTGCTGGATGCATGGTTACAGAGGGAAAGGTACTGAAAGGCTGTGGCATTAGGGTCATTCGGAAGGGCAAAGTTGTTCATGTTGGTATTCTCGATTCTTTGAGACGGGTAAAGGAGGTTGTGAAAGAGGTAAATGCTGGTTTGGAGTGTGGGCTTGGATTGGAGGACTATGACGATTGGGAGGAGGGAGATATTCTTGAGGCCTTCAACACAGTTCAGAAGAGGAGGACCCTTGAAGAGGCATCAGCATCAATGGCAGCTGCAGTGGAAGAAGTAGGAGTTGAACTGTA 3065 0.4287 MLILGGNVQGAMTSLASPVSLGSLVGVSSSARSHSFVRRRVSFCRGNLISRKRWHCVSLSICKYSVTTTDFIADQGHAVSLDSNNNSGNKGGDGDAGFLLKPPPKPILKSSETKGNSGMKSEAWAPSEVSEDSDDEKLDDVEERKKVIESLGDVLEKAEKLEKSSLDNKRNNVAVNKPMVSNATVNPRTGRPVNSTENRKTKTMKSVWRKGDTVANVQKVIKVVPKHDITNEGKKSQTGDGEKGTSQSRAHLRAPQSPSRPQPMLQGKPSIAPPPVKKPVVLKDKGAVDIPGKTKQRKPILIDKFAGKKPVVDPLIAQAVLAPPKPGKGPPPGKFRDERRKKGASAGGGPRRRIIDDDDIPDEDASELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEILEVSDKGMLIEELAYNLAVSEGEILGYLYSKGIKPDGVQTLDQNMVKMICKQYNVEVIDTDPVKFEKLVKKREILDEVDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKTKVAASEAGGITQGIGAYKVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPLIIAINKIDKDGANPERVMQELSIIGLMPEDWGGNIPMVQISALRGENIDDLLETVMLVAELQELKANPDRTAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDIVVCGEAFGKVRALFDDGGKRVDAATPSIPVQVIGLNNVPIAGDEFEVVDSLDAAREKAEARAEFLRSERISAKAGDGRVTLSSLASAVSAGKLAGLDLHQLNIILKVDLQGSIEAVRQALQVLPQDNVTLKFLLAATGDVSTSDIDLAVASKAIILGFNVRAPGPVKSYAENKGVEIRLYKVIYELIDDVRKAMEGLLEPVEEQVTIGSAEVRATFSSGSGRVAGCMVTEGKVLKGCGIRVIRKGKVVHVGILDSLRRVKEVVKEVNAGLECGLGLEDYDDWEEGDILEAFNTVQKRRTLEEASASMAAAVEEVGVEL 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01053 1021 Gene3D Translation factors 906 1002 - -
Bva09g01053 1021 Hamap Translation initiation factor IF-2 [infB]. 7 1001 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bva09g01053 1021 MobiDBLite consensus disorder prediction 83 140 - -
Bva09g01053 1021 CDD mtIF2_IVc 911 993 - -
Bva09g01053 1021 Pfam Translation initiation factor IF-2, N-terminal region 417 463 IPR006847 -
Bva09g01053 1021 MobiDBLite consensus disorder prediction 175 201 - -
Bva09g01053 1021 TIGRFAM IF-2: translation initiation factor IF-2 414 1003 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bva09g01053 1021 MobiDBLite consensus disorder prediction 331 359 - -
Bva09g01053 1021 MobiDBLite consensus disorder prediction 240 264 - -
Bva09g01053 1021 CDD IF2_mtIF2_II 672 753 IPR044145 -
Bva09g01053 1021 Coils Coil 751 771 - -
Bva09g01053 1021 MobiDBLite consensus disorder prediction 175 204 - -
Bva09g01053 1021 SUPERFAMILY Translation proteins 907 1001 IPR009000 -
Bva09g01053 1021 ProSitePatterns Initiation factor 2 signature. 954 976 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bva09g01053 1021 Gene3D - 800 905 IPR036925 -
Bva09g01053 1021 MobiDBLite consensus disorder prediction 318 365 - -
Bva09g01053 1021 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 492 665 IPR000795 GO:0003924|GO:0005525
Bva09g01053 1021 TIGRFAM small_GTP: small GTP-binding protein domain 494 655 IPR005225 GO:0005525
Bva09g01053 1021 Gene3D - 489 667 IPR027417 -
Bva09g01053 1021 Gene3D Translation factors 668 783 - -
Bva09g01053 1021 Pfam Translation-initiation factor 2 800 893 IPR023115 -
Bva09g01053 1021 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 36 1011 - -
Bva09g01053 1021 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 36 1011 IPR015760 -
Bva09g01053 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 668 IPR027417 -
Bva09g01053 1021 MobiDBLite consensus disorder prediction 282 298 - -
Bva09g01053 1021 CDD IF2_eIF5B 495 661 - -
Bva09g01053 1021 SUPERFAMILY Translation proteins 668 751 IPR009000 -
Bva09g01053 1021 PRINTS GTP-binding elongation factor signature 600 609 IPR000795 GO:0003924|GO:0005525
Bva09g01053 1021 PRINTS GTP-binding elongation factor signature 496 509 IPR000795 GO:0003924|GO:0005525
Bva09g01053 1021 PRINTS GTP-binding elongation factor signature 564 575 IPR000795 GO:0003924|GO:0005525
Bva09g01053 1021 PRINTS GTP-binding elongation factor signature 548 558 IPR000795 GO:0003924|GO:0005525
Bva09g01053 1021 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 799 911 IPR036925 -
Bva09g01053 1021 MobiDBLite consensus disorder prediction 225 239 - -
Bva09g01053 1021 Pfam Elongation factor Tu GTP binding domain 497 657 IPR000795 GO:0003924|GO:0005525
Bva09g01053 1021 MobiDBLite consensus disorder prediction 225 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01053 Bva-Chr9 5382655 5390998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01053 493 891 Eukaryotic Initiation Factors Gene Family AT1G76810 30.085 4.66e-30 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01053 09 5382655 5390998 Bva09g01053 09 5382655 5390998 ECH