Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01050 ATGGAGGATAATCAATGGCATCTCTATGACCATGACCCACTTCTTCTCACCGACGCATCTTCGCTACAACTACAAGAAAGCACGTCTATTCACTGCAATTATATTTCACAGATATCACTGAGCTCTCGAAGTTTGACAATGGCGGATCTTGAGTCTCATAGTAACCCAAGTGACGAATTTTCTTGGAAAAGACGAAGCTTTGAGAAACACAGTGCGCAATCGGATAACCCAGCTGcgaaaaatgtatttgatgGCCGATCAATATTGGGGTATTCTTTAACGTCTCCTGATTTGGTCATCTGCGCTGGATCACCAGATATTGCCACTAACAGCTACGTGAACTCCCCTGAGTTGTTGGAAAGAAAATCATGTGTGAACATGCACTCGTCAATAGAGCTCTCTTTAGAGGATGGAATTAATGGGTCTGAAAATGACAATACTATTAAGACCCCAACTGttaaattctctaatttttgccaAACTTTTGAAAAGGAACTATCTCCTGAAGCTTCCTTTGAACTTTTTCCAACTCCAGAAATCAAGGATGAGTCTCCCAAAGATTACCTTCCTCAAAGTCAATTGCCACAAGTTATGGAAGTATCTGAAGGGGCAGAATGTGAGCTTTCAGAAGATGATGGAGGTATTGCAATGGAAGATAGATATGAGAAGCTGAAAAGGAAATTTGAGTGTCAGAAGAAGGAGCTGGCTGAAACAAAGACGGTGTTGGAGGAAGTTAAGAGGGAGAAACAACAGAAGAGCAGAGAATGTCAAGAAGCTTGGAAGTCATTGAAGGAGCTCCAAAATGAGCTCATGCGAAAGTCCATGCATGTTGGATCTTTAGCATTTGCCGTTGAGGGAcaagtgaaagagaaaagcaGGTGGTTTTCATCATTGAGAGACTTGATGAGGAAAGTGAAGATCATGAAAATGGAACACATCAAGCTAGCAGAGGATGCAGAGACGTATAAGAAGTATCTTACAGATATGAGGGAAATGGAGTTGTCTATTAAGTCCAAGTTACATGAGCAATTGGAGTCACATGAAGATCTCAAGTGCAAATATGTTGAAGGGGCTATAGAACGAAAAGAGCTTTACAATAAGGTTTTGGAGTTGAAAGGAAACATAAGGGTGTTTTGCCGGTGTAGACCTCTCAATGCTGATGAGGTAACATCTGGAGCTACAATGGTAATAGATTTTGAATCTGCTAAAGATGGTGAGCTTACTGTAATGTCGAATGGGGCTCCTAGAAGGACTTTCAAGTTTGATGCTGTTTTTGGTCCTCAAGCAGAACAAGCCAATGTTTTTGACGGGACAGCACCATTTGCTGCCTCGGTTTTAGACGGGTACAATGTATGCATCTTTGCTTATGGGCAGACGGGGACAGGAAAAACCTTTACAATGGAGGGCACAGAAGAGGCTCGGGGAGTTAATTTCAGGACCCTTCAGAAACTGTTTGACATAATCCAGGAGAGACAGAAGCTCTATCGTTATGATGTGTCTGTAAGCGTCTTAGAAGTCTACAATGAACAAATACGAGATTTGCTAGTTTCAGGAAATCAGCCAGGAATGACTGCAAGAAGGCTTGAAATAAAGCAAGCAGGTGAAGGAATGCATCATGTTCCAGGGTTGGTTGAGGCACCTGTGAAGAACATGGCTGAAGTGTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTTAGTTCAACCAATGCTAATGAGCACAGCAGTCGATCCCACTGCATCCACTGTGTTATGGTTAAGGGGGAGAATTTGTTAAATGGGGAATGCACGAGAAGTAAGTTATGGTTGGTGGACTTGGCAGGCAGTGAGCGAGTGGCAAAGACAGAAGTACAAGGGGAACGGCTTAAGGAGGCACAAAATATTAACAGGTCTCTGTCTGCACTAGGAGATGTCATATCAGCCCTTGCAACAAAATCCCCACACGTCCCTTTCAGAAACTCCAAGCTTACGCACTTGCTGCAAGACTCTCTAGGAGGAGATTCAAAGACACTCATGTTTGTACAGATTAGTCCTAATGAACACGATTTGGGCGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGACCTGCAAGAAGGCAATTGGACTCCTTTGAACTTCCGAAATACAAGCAGATGGCTGAGAAAACCAAGCAAGAGATGAAGAGCAAGGACTTGCAGATAAAGAAGATGGAGGAAACTATCCATGGATTAGACTTGAAGATAAAGGAAAGAGACAGTAAAAGCAAAAGTCTGCAAGACAAGGTTAAGGAACTGGAAACACAACTTATGATTGACAGAAAGCTAGCTCGTCAACATGTAGAGTCAAAGATATCTGAGCAACACTCAGTTAAACTCCAAGAAGAGCTAAATAATGCACCAACGAGACCAGCACTTGAAAAAAGACCATTAGGAAGTCACAAGAACTTCAATGATCGATTAAGTGGTATATGGGGCAAAGACCAAGTAATGTCAGCTCGACCACTTACGGAGAACAATAGCTTTAAACCCTCTTTTGCCTTTCCCACAATGGAAAATTCTATCAAGCACATTGATccaaatgagaaagaaaacaaccCTGAGATGGCTGAAAGAATCTTACTACCAAAAAGGACTGGAAGAGCTTCTATCTGCACAATGTCGCCGCGGATtcctgctgctgctgcttcaAGGCGCAACTCTCTGATCCCACTTCCAATTTTGCCTAGATTAATGGAGCTGCAAACAAATGGAGCTGACCAGAAAGATGGCAGTGGAGAATCTGAAACCAGCTCTTTGCCTACACAGACACATTGCGAGAGTCCAAAGGGAATAAGAAGTGGAAGTAAGAGGATAAGCAGCATACTAAGGCGAAGTCTCCAAAAGAAAGTTCAGGTGAAATCACCACTGCAGCAGCACATGAGAAGAGTTGGTGTAAATGTGGGGATGGAAAAAGTTAGAGTATCCATTGGAAGTCGAGGTAAAATGGGACAAAGGGTATTGCTGGGAAATGCTAAAAGAGCTGGAACAAAAGAAACCCACCAAAAGAATAGtcagaaggaaaaagaaaggggatGGAATGCAGGAACAGTAGTGAAAACAGTTATCTG 3110 0.4119 MEDNQWHLYDHDPLLLTDASSLQLQESTSIHCNYISQISLSSRSLTMADLESHSNPSDEFSWKRRSFEKHSAQSDNPAAKNVFDGRSILGYSLTSPDLVICAGSPDIATNSYVNSPELLERKSCVNMHSSIELSLEDGINGSENDNTIKTPTVKFSNFCQTFEKELSPEASFELFPTPEIKDESPKDYLPQSQLPQVMEVSEGAECELSEDDGGIAMEDRYEKLKRKFECQKKELAETKTVLEEVKREKQQKSRECQEAWKSLKELQNELMRKSMHVGSLAFAVEGQVKEKSRWFSSLRDLMRKVKIMKMEHIKLAEDAETYKKYLTDMREMELSIKSKLHEQLESHEDLKCKYVEGAIERKELYNKVLELKGNIRVFCRCRPLNADEVTSGATMVIDFESAKDGELTVMSNGAPRRTFKFDAVFGPQAEQANVFDGTAPFAASVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLQKLFDIIQERQKLYRYDVSVSVLEVYNEQIRDLLVSGNQPGMTARRLEIKQAGEGMHHVPGLVEAPVKNMAEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVQGERLKEAQNINRSLSALGDVISALATKSPHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPNEHDLGETICSLNFASRVRGIELGPARRQLDSFELPKYKQMAEKTKQEMKSKDLQIKKMEETIHGLDLKIKERDSKSKSLQDKVKELETQLMIDRKLARQHVESKISEQHSVKLQEELNNAPTRPALEKRPLGSHKNFNDRLSGIWGKDQVMSARPLTENNSFKPSFAFPTMENSIKHIDPNEKENNPEMAERILLPKRTGRASICTMSPRIPAAAASRRNSLIPLPILPRLMELQTNGADQKDGSGESETSSLPTQTHCESPKGIRSGSKRISSILRRSLQKKVQVKSPLQQHMRRVGVNVGMEKVRVSIGSRGKMGQRVLLGNAKRAGTKETHQKNSQKEKERGWNAGTVVKTVI 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01050 1036 ProSiteProfiles Kinesin motor domain profile. 374 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva09g01050 1036 Coils Coil 749 769 - -
Bva09g01050 1036 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 214 1017 - -
Bva09g01050 1036 PRINTS Kinesin heavy chain signature 601 619 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva09g01050 1036 PRINTS Kinesin heavy chain signature 448 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva09g01050 1036 PRINTS Kinesin heavy chain signature 650 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva09g01050 1036 PRINTS Kinesin heavy chain signature 570 587 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva09g01050 1036 Coils Coil 721 741 - -
Bva09g01050 1036 CDD KISc_C_terminal 372 702 - -
Bva09g01050 1036 MobiDBLite consensus disorder prediction 1009 1025 - -
Bva09g01050 1036 Gene3D Kinesin motor domain 369 744 IPR036961 -
Bva09g01050 1036 Pfam Kinesin motor domain 380 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva09g01050 1036 MobiDBLite consensus disorder prediction 1005 1025 - -
Bva09g01050 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 738 IPR027417 -
Bva09g01050 1036 ProSitePatterns Kinesin motor domain signature. 600 611 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva09g01050 1036 Coils Coil 218 269 - -
Bva09g01050 1036 MobiDBLite consensus disorder prediction 918 943 - -
Bva09g01050 1036 SMART kinesin_4 372 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva09g01050 1036 MobiDBLite consensus disorder prediction 917 951 - -
Bva09g01050 1036 PANTHER KINESIN-LIKE PROTEIN KLP-3 214 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01050 Bva-Chr9 5373736 5378759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01050 324 731 Calmodulin-binding Proteins AT5G65930 41.289 1.65e-82 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01050 09 5373736 5378759 Bva09g01050 09 5373736 5378759 ECH