Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01048 ATGGACGAAGACACCATTTTCCCTACCGACGCAGATCTAGACCTCAGCTTTACCAGTTGCACCTCCGCCACAACTGATCGCACCTTTGCTTCTTCTAGTGCTCGTACTAGTTTAGCTCGAAGCAGCGTAACTCTCAGCTTCAACGACCGTCTCTCCACCGCTTCCACCACCGCTGCTGCCACCACCACCACACTTCCTCCTCTTTACCTCCGCCCTCACCGGAGCTCAGACCCGCATTGGTCGGCCATCAAAGCAGCCACCACTCTCTCCTCTGACGGCACACTCCACCTCCGACACCTTAAACTCCTCCGCCACCTCGGAACCGGTAACCTAGGACGCGTCTTCCTCTGCCGCCTCCGGGATAACGACCATGAGAATTTCGCTCTCAAGATGGTTGACAGGGACTTGCTTAGCAGCAAGAAGCTGTCACATGTGCAAATGGAGGCTGAGATTCTTTCCATGCTGGACCATCCTTTTCTCCCTACGCTTTATGCCCACATCGAGGTCTGGCATTACACGTGTCTCTTGATTGATTATTGTCCAGGTGGCGACCTCCACTCCCTCCTCCGCAAACAGGTAGGGAACCGGCTGCCGGTTCAGGCTGTTCGGTTCTTCGCGGCTGAGGTGCTGGTGGCGTTGGAGTATTTGCATGCAAACGGCGTCGTTTACAGGGATCTGAAACCGGAGAACGTTTTGTTACGTGAAGATGGTCATATAATGCTGTCCGACTTCGATTTGTGTTTCAAGGCCGATGTGGTCCCCACATTCGAGTGTCGGCTCCACAAAAAACTGGGGTCACTTGACAAACCGCGCGGGTATAGCTGTTTCCGTGGGGTTGACCGGAGGGGTGCGAAATCTCGGCAGGAGGTTGTTGAGGCGGAGTTCGTGGCGGAGCCCACGGCGGCGTTTTCCATGTCGTGCGTTGGGACCCACGAGTACTTGGCGCCGGAGCTTGTCTGCGGTAGTGGACACGGAAACGGCGTGGATTGGTGGGCGTTCGGGGTGTTTATTTACGAGCTATTATACGGGACGACGCCGTTCAAAGGGGTGAACAAAGAAAGCACCCTGCGCAATATAGCATCGACCAGGGATATGAGGTTCCGCGTGGCGGAGATGGAGGAAGAAGGAATGGCAGAGGCGAGAGATTTGATAGAGAAGCTACTAGTGAAGGATCCAAGGAGGAGGGTAGGGTGCGCCAGGGGTGCGACAGATATTAAACGGCACCCCTTTTTTGACGGGATCAAGTGGCCGTTGATTCGGACTTATAAGCCACCGGAGGTCCGCGGGCTTTTGAGGAGAGGAAGATCGCACGTGAGTCACGTGAGAGTTGGAGCTTCCCTTTTGAGAAGGCGATGCTGGTGGAAGAAAGGACTTGATTATCTTAAGAGAAATAAGGGAATTAAATATAGTTTAGTTTCCAAACATAGTAATAACAATTActatagttattttaataagtcaTACTA 1466 0.5266 MDEDTIFPTDADLDLSFTSCTSATTDRTFASSSARTSLARSSVTLSFNDRLSTASTTAAATTTTLPPLYLRPHRSSDPHWSAIKAATTLSSDGTLHLRHLKLLRHLGTGNLGRVFLCRLRDNDHENFALKMVDRDLLSSKKLSHVQMEAEILSMLDHPFLPTLYAHIEVWHYTCLLIDYCPGGDLHSLLRKQVGNRLPVQAVRFFAAEVLVALEYLHANGVVYRDLKPENVLLREDGHIMLSDFDLCFKADVVPTFECRLHKKLGSLDKPRGYSCFRGVDRRGAKSRQEVVEAEFVAEPTAAFSMSCVGTHEYLAPELVCGSGHGNGVDWWAFGVFIYELLYGTTPFKGVNKESTLRNIASTRDMRFRVAEMEEEGMAEARDLIEKLLVKDPRRRVGCARGATDIKRHPFFDGIKWPLIRTYKPPEVRGLLRRGRSHVSHVRVGASLLRRRCWWKKGLDYLKRNKGIKYSLVSKHSNNNYYSYFNKSY 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01048 488 Pfam Protein kinase domain 304 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01048 488 Pfam Protein kinase domain 102 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01048 488 ProSiteProfiles Protein kinase domain profile. 100 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01048 488 SUPERFAMILY Protein kinase-like (PK-like) 77 433 IPR011009 -
Bva09g01048 488 Gene3D Transferase(Phosphotransferase) domain 1 184 251 - -
Bva09g01048 488 PANTHER FLIPPASE KINASE 1-RELATED 9 444 - -
Bva09g01048 488 PANTHER TELOKIN/MYOSIN LIGHT CHAIN KINASE-RELATED 9 444 - -
Bva09g01048 488 SMART serkin_6 100 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01048 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Bva09g01048 488 Gene3D Transferase(Phosphotransferase) domain 1 305 425 - -
Bva09g01048 488 Gene3D Phosphorylase Kinase; domain 1 99 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01048 Bva-Chr9 5360458 5362419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01048 3 488 AGC Kinase Gene Family AT3G14370 65.314 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva09g01048 Pkinase 5.7e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01048 09 5360458 5362419 Bva09g01048 09 5360458 5362419 ECH