Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01023 ATGCTTGAACCGCGTCAATCTGATATACCTGCCCTGATTCTGGTCTTGGTTGTATTTCCTTTGGTTGCTTACATCCTACTTGGGAAATGGAGTGAGGCctcaaagaaaagagataggATAACTTTGCTTGCCCAGTTGGCTGCGGACGAAGCTCTTAGAGCAGAAGAAATGGCTGTTCCAGATGTTATTCCTCCAGTGTCTTCATCAAAGAGTGAAATTCATGTGTGTGCTAGGTGCTCAGCTCCTGCAAGAACTCGCTGTTCCAAATGCAAATCTGTTAGATATTGCTCTGGGAATTGCCAAATAATTCATTGGAGGCAAGTTCACAAGCATGAATGCCAGCCATTGGAACCTGATAAACCTAGCTCATTTCCTCTGGCCGTCTCATTTGAGGAATACAGTCATGATAGTGgcttattttatgaaaacaaGTACTCTCCATTATTCAGTGATAATTTGAACCAGACTATAAAGGGGGGAGAGGCTATGGATAATGTAGTTCACCCTCTAATAGGCACTGATGCTTCTACAGTTGATCATGCATTCCCTAACAATTCTCATGTCCCCATCCTGGAGAGAAGAACTTCCCATAAATCGAACAGAGAAGCATGGAGAAGAGATAATGGAACTATGCATGACTCTTCTGTCGAATCCTCTGGGTATCAGGCTACCCTTTCTCCCTCTTCTAGTGTGGTATCAAAGGAAGCCTTTATGAGACAgaagTCTAGAAATAATGACTATGCTGAgttggaagaagaaatttcaaagaaggCTAATGGTTCTGGCCCCAGTGTTCCTATTTATCAAGAAGATGCTTCAGCAGGCCCAAAGTCCATGAGTGATAACTATCAAAGTCAACTTGGAAATGGATTTATTGCAAGAAGCAACTTTGGATGTTCAAGTCTGCCTAATGCAGCAAACAATTTTGAAGTTGTAgatgaatttgaaaaagataTATCTACCAAAGGAGGGAAAATAACCATGGGTGAAATAGGGTTATCTGAAGAAGCAGCAGAACCCTTATGTTCTTCTGAAATGACAACTAAAGGAGGCATAAAGGCTAAAAAGATTTCACGCCCCCCTAAGACTAGATGTTCTAAAATGCCAAAATCGAAATTGATGGTATCAGGAGACTTGTGTTGCCcagaaatagagaagaaagggCAAATTGCTGGCGCAAAAATTGCTGGAATTAGGGATGCTCTCCCTTCACAAGGAAGTACTGGGAGTGCAAGtattgaaattatgaaaacgATGGGCTTGAGGAAATCAGGAAAACTTACTACGTTGGCCACCTCTGAAGTCAGTGGAGACAAGTGCAAGAAGATAAAGATGTTGTTTCCTTATGATGATTTTGTAAAGTTGTTTCATAGTGAAGTCTTTGGCATATGCCCTAGGGGCCTTTTGAATTGTGGGAACAGTTGCTATGCGAATGCTGTCTTGCAGTGCTTAACATGCACAAAACCTCTTGTTGTCTATTTGCTTTGCAGATCACATTCCAAAACCTGTTGTGCTAAAGATTGGTGTCTCATGTGCGAACTAGAGCAACATATACTGAGGCTGCAAGAAAATGGTGGCCCTCTATCTCCAAGCAGAATACTTTGGCACATGCAGAGCATTAATTGCCAAATGGGTGATGGAAATCAGGAAGATGCCCACGAATTTTTAAGgcTTCTAATTGCATCAATGCAATCTATATGCTTGGAGGGACTTGGTGGAGAGAAAAAAGTTGAGCCGCGGCTGCAAGAAACAACTTTTGTCCAACATACTTTTGGGGGTCGTCTTCGATCGAAGGTTAAGTGTTTGAAATGTAATCATGAATCAGAACGATATGAGAATATTATGGACCTAACATTAGAGATATTGGGCTGGGTTGAATCACTTGAAGATGCACTGACTCAGTTTACATCCCCTGAAGATTTGGATGGAGAAAATATGTACAGATGTGGAAGGTGTACTGCCTATGTTCGAGCCAGGAAGCAATTGAGCATACATGAGGCACCTAACATTCTGACAATAGTCTTGAAGAGATTTCAGGAAGGAagatatggaaaaataaacaagtgtATAACTTTTCCTGACATGTTGGATATGATTCCCTTTATGACTGGGGCGGGCGACGTTCCTCCACTTTACCTGCTCTATGCTGTTGTCGTGCACCTGGACACACAAAATGCATCTTTCTCTGGGCATTATGTCTCATACGTGAAAGATATGCAAGGGAGGTGGTTCAGAATAGATGATACTGAGGTTCAGCCAGTGCCGATGAGTCAGGTGATGTCAGAAGGAgcatatatcttattttacatGAGGTCTTGTCCCCGCCCCCAAGCAGCGCTGACAGGGAAAACAAAACAGCAACAAGTCCCTGACTCTTCAAAGTGCTACCCAGTGGAAGCTCGGAATCCATCCCGGTCAGGACATAGTAGACATGGAAGTCAATTTGTTGGTTCAGAGCCTTCACCTGAAGCCAAACCAGAAATGCCTACCTCACATGGTGTCCTTAGAAGGAGTGCCAACAGAAACGTCCTGCCGGTGACAGAAACTTATGCTGAAAACTTCCGAGATTTTCCAGATGCCGCGTCAAGTGATTGGTCCCTATTTACAAGCTCAGATGAGGCTTCTTTCACAACTGAGAGTACTAGGGATTCCTTCAGTACTGTAGATTACTCTGATTCATGCAACATGGATCCACTTTCGTCCATCTTCGGCTATGCTCCAGAAAACTCGAGAATTGCTGCTCGCTATGCAAAGTTTTCAAATAGTAGGCCACTTACAAGGTTCTTTCCAAACTCCTCCTTGTCCAGCCATCCTCTTGAAAGAGTACAGATAATGGATCAGTCAAGATGGGTCCGCAGTTCCTCAGTTGATCCCTCTTCAAATGGGAACCATGGCATGTATGTAAATTATGAAAGTAATCCTGTATATGGCTTCTA 2936 0.4097 MLEPRQSDIPALILVLVVFPLVAYILLGKWSEASKKRDRITLLAQLAADEALRAEEMAVPDVIPPVSSSKSEIHVCARCSAPARTRCSKCKSVRYCSGNCQIIHWRQVHKHECQPLEPDKPSSFPLAVSFEEYSHDSGLFYENKYSPLFSDNLNQTIKGGEAMDNVVHPLIGTDASTVDHAFPNNSHVPILERRTSHKSNREAWRRDNGTMHDSSVESSGYQATLSPSSSVVSKEAFMRQKSRNNDYAELEEEISKKANGSGPSVPIYQEDASAGPKSMSDNYQSQLGNGFIARSNFGCSSLPNAANNFEVVDEFEKDISTKGGKITMGEIGLSEEAAEPLCSSEMTTKGGIKAKKISRPPKTRCSKMPKSKLMVSGDLCCPEIEKKGQIAGAKIAGIRDALPSQGSTGSASIEIMKTMGLRKSGKLTTLATSEVSGDKCKKIKMLFPYDDFVKLFHSEVFGICPRGLLNCGNSCYANAVLQCLTCTKPLVVYLLCRSHSKTCCAKDWCLMCELEQHILRLQENGGPLSPSRILWHMQSINCQMGDGNQEDAHEFLRLLIASMQSICLEGLGGEKKVEPRLQETTFVQHTFGGRLRSKVKCLKCNHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFMTGAGDVPPLYLLYAVVVHLDTQNASFSGHYVSYVKDMQGRWFRIDDTEVQPVPMSQVMSEGAYILFYMRSCPRPQAALTGKTKQQQVPDSSKCYPVEARNPSRSGHSRHGSQFVGSEPSPEAKPEMPTSHGVLRRSANRNVLPVTETYAENFRDFPDAASSDWSLFTSSDEASFTTESTRDSFSTVDYSDSCNMDPLSSIFGYAPENSRIAARYAKFSNSRPLTRFFPNSSLSSHPLERVQIMDQSRWVRSSSVDPSSNGNHGMYVNYESNPVYGF 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01023 978 Pfam MYND finger 76 113 IPR002893 -
Bva09g01023 978 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 466 772 IPR028889 -
Bva09g01023 978 CDD Peptidase_C19E 465 770 - -
Bva09g01023 978 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 467 482 IPR018200 GO:0004843|GO:0006511
Bva09g01023 978 SUPERFAMILY HIT/MYND zinc finger-like 73 116 - -
Bva09g01023 978 MobiDBLite consensus disorder prediction 779 839 - -
Bva09g01023 978 Pfam Ubiquitin carboxyl-terminal hydrolase 467 769 IPR001394 GO:0004843|GO:0016579
Bva09g01023 978 MobiDBLite consensus disorder prediction 193 225 - -
Bva09g01023 978 SUPERFAMILY Cysteine proteinases 463 772 IPR038765 -
Bva09g01023 978 MobiDBLite consensus disorder prediction 779 793 - -
Bva09g01023 978 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20 929 - -
Bva09g01023 978 ProSiteProfiles Zinc finger MYND-type profile. 76 113 IPR002893 -
Bva09g01023 978 MobiDBLite consensus disorder prediction 193 212 - -
Bva09g01023 978 Gene3D Cysteine proteinases 463 781 - -
Bva09g01023 978 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 20 929 - -
Bva09g01023 978 Gene3D - 65 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01023 Bva-Chr9 5223663 5233919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01023 444 792 Miscellaneous Gene Families AT4G31670 50.571 2.24e-122 385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01023 09 5223663 5233919 Bva09g01023 09 5223663 5233919 ECH