Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00913 atgaaacccTCCATGTTCAGATCCTTACACTCTGCCCTATCTCGGGGCTCTTCTCACCTCTCACGTTGTGGCTATGCCACCGACTCAGTCCCCGAGCGCAAGGTCGCCGTCCTCGGAGCCGCCGGCGGGATCGGTCAGCCACTTTCGTTGTTGATGAAGCTTAATCCCCTGGTTTCTAGCCTCTCACTTTACGATATCGCTGGGACACCCGGTGTCGCCGCCGATGTCAGCCATATCAACACCAGATCCGAGGTGGTTGGTTATCAAGGTGAAGAACAGCTTGGGAAAGCTTTGGAGGGATCAGATGTTGTTATAATTCCCGCTGGTGTGCCCAGAAAGCCTGGAATGACACGTGATGATCTTTTCAACATAAATGCTGGAATTGTCAAATCACTCTGCATTGCTATTTCCAAGTACTGCCCCAAAGCCCTTGTCAACATGATCAGCAATCCTGTGAACTCCACTGTCCCAATTGCTGCTGAGGTTTTCAAGAAGGCGGGGACTTATGATGAGAAAAGATTGTTCGGTGTTACTACCCTTGATGTTGTCAGGGCAAAGACTTTCTATGCTGGAAAGGCCAAAGTTCCAGTTGCAGAGGTCAATGTGCCTGTTGTAGGTGGTCATGCAGGCATAACTATTCTCCCACTATTTTCTCAAGCAACACCACAAGCCAACCTGGATGATGATGTAATTAAGGCTCTTACAAAGCGAACGCAGGATGGCGGAACAGAAGTTGTGGAAGCAAAGGCTGGAAAGGGTTCTGCAACATTATCAATGGCCTATGCTGGAGCCCTTTTCGCTGATGCTTGTCTCAAGGGACTTAATGGGGTTCAAGATGTAGTTGAGTGTTCATTTGTGCAATCAAATGTCACTGAACTTCCTTTCTTTGCTTCCAAGGTGAGGCTTGGTAAGAATGGTGTGGAGGAAATTTTGGGCTTGGGTCCACTTTCTGATTATGAAAAACACGGCCTTGAAAGCCTTAAGCCTGAGCTTCTATCATCTATTGAGAAGGGAATCAAATTTGCCAACCAGTA 1034 0.4749 MKPSMFRSLHSALSRGSSHLSRCGYATDSVPERKVAVLGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINTRSEVVGYQGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCIAISKYCPKALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKAKVPVAEVNVPVVGGHAGITILPLFSQATPQANLDDDVIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVQDVVECSFVQSNVTELPFFASKVRLGKNGVEEILGLGPLSDYEKHGLESLKPELLSSIEKGIKFANQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00913 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 34 176 IPR036291 -
Bva09g00913 344 Gene3D - 32 177 - -
Bva09g00913 344 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 178 341 IPR022383 GO:0016616
Bva09g00913 344 PANTHER MALATE AND LACTATE DEHYDROGENASE 1 343 - -
Bva09g00913 344 CDD MDH_glyoxysomal_mitochondrial 34 342 IPR010097 GO:0006099|GO:0030060
Bva09g00913 344 PANTHER MALATE DEHYDROGENASE 1 343 - -
Bva09g00913 344 ProSitePatterns Malate dehydrogenase active site signature. 177 189 IPR001252 GO:0006108|GO:0016615
Bva09g00913 344 Pfam lactate/malate dehydrogenase, NAD binding domain 34 176 IPR001236 GO:0016491
Bva09g00913 344 SUPERFAMILY LDH C-terminal domain-like 177 343 IPR015955 GO:0003824|GO:0016616
Bva09g00913 344 Gene3D - 178 343 IPR015955 GO:0003824|GO:0016616
Bva09g00913 344 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 34 343 IPR010097 GO:0006099|GO:0030060
Bva09g00913 344 PIRSF Lac_mal_DH 29 342 IPR001557 GO:0016616|GO:0019752
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00913 Bva-Chr9 4717571 4720241 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00913 09 4717571 4720241 Bva07g01681 07 15843318 15846491 ECH
Bva09g00913 09 4717571 4720241 Bva09g00913 09 4717571 4720241 ECH