Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02373 ATGCCAAGTATACTTGTTTTGGGTATTTTCccttcctttttatttgttaacctGTATATGAAATCTACAGGCTTGAAGAATGCTTCATTTGCAAGATTAACAAATGATTCATCCCAACATTCCAGAATTCACAGTGACAAATTGCTGGATGGACTTCTAGCTTCTGGATACGAAGAAGAGTCGTGCATAAGCAGGTTCCAATCGTATTTATACCGCAAAGCTTCCCCTCACAAGCCCTCTCAATATCTAATATACAAACTACGAAAGTATGAAGATTTGCATAGAAAGTGTGGAGTTCATACAAAAGCCTACAACAGAACCATGGTAAAGCTCTTGAGATCTAAGAACCATAGTGCTGCTACAATGTGCAAATACCTTGTATGGACACCTGTTAATGGATTGGGGAACAGAATGATAAACATGGCTGCTGCATTTCTTTACGGTCTTGTCACAGATCGAGTCTTACTTGTCCAATTTCAGAGTGATATGATCGGCCTGTTTTGTGAGCCATTCCTCAATTCAACTTGGATTTTGCCTaaagattttccttttaataatCACCATAGGCATATTGAAACATATCAAAATATGCTCAAAAAGGGCAAGGGCAATGATTCCAAAGGGATTGTGCCGTCAGTTATGCATCTTAATATGCAACACACTTCTAATGACCCCAAAATGTTTTTTCATTGTGATCATAATCAAGACCTTCTCCAACAAGTTTCTTTGTTAATCTTACAGTCAGATCAATATTTTGTTCCTTCTCTTTTCATGACACCATCTTTTAACACAGAACTTATCAAAATGTTCCCAGAAAAAGAcattatttttcatcatttggGACGTTATCTTTTCCACCCTTCAAACGAGGCTTGGGGAATAATCAGTAGGTTCTATCAAGCATACTTGGCCAATGCAAATGAGAAGATTGGCCTACAAATAAGAGTGTTTGTTCCACAGCACACTCCATATGAAAGAATTATAGAACTACTTTTAAATTGTACCTTGAAGCATAAGCTACTACCAGAATTGGACAAGCAAAATACTGTTTCTTCTATATGGGAAAATCAGACTTTGAAAGCTGTTATGGTGGCATCTTTGGATCCAGTATATGGTGATAACTTAAGGACAATGTATTTGTCAAAGCCAACTGCTACAGGTGAGATAATAGGAGTTTATCAACCAAGTCACGAAGACCATCAGAAGTTCCATGACGACAGACACAACATGAAAGCATGGACAGAAATGTATCTATTAAGTATGAGTGATGTATTGGTGACCACCTCTCTGTCTACTTTTGGGTACGTGGCTCAAGGTTTAGGCGGTTTGAAGCCATGGCTTCTTTACAGGTTAACGAGCAACCAGACCCATGATCCACCTTGTGAACGAGACTTCTCTGTGGAGccttgttttcatatttctccCAAGTATAATTGCGAAGGGAAGACCGTGGAACATCTTAGTTCTCTTTACCCTCACTTGAGAGAATGTGTCGATTATTCTTTTGGAACCAAGCTGGTAAATGATTCCGAGTA 1535 0.37 MPSILVLGIFPSFLFVNLYMKSTGLKNASFARLTNDSSQHSRIHSDKLLDGLLASGYEEESCISRFQSYLYRKASPHKPSQYLIYKLRKYEDLHRKCGVHTKAYNRTMVKLLRSKNHSAATMCKYLVWTPVNGLGNRMINMAAAFLYGLVTDRVLLVQFQSDMIGLFCEPFLNSTWILPKDFPFNNHHRHIETYQNMLKKGKGNDSKGIVPSVMHLNMQHTSNDPKMFFHCDHNQDLLQQVSLLILQSDQYFVPSLFMTPSFNTELIKMFPEKDIIFHHLGRYLFHPSNEAWGIISRFYQAYLANANEKIGLQIRVFVPQHTPYERIIELLLNCTLKHKLLPELDKQNTVSSIWENQTLKAVMVASLDPVYGDNLRTMYLSKPTATGEIIGVYQPSHEDHQKFHDDRHNMKAWTEMYLLSMSDVLVTTSLSTFGYVAQGLGGLKPWLLYRLTSNQTHDPPCERDFSVEPCFHISPKYNCEGKTVEHLSSLYPHLRECVDYSFGTKLVNDSE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02373 511 Pfam Xyloglucan fucosyltransferase 35 479 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bva08g02373 511 Gene3D - 120 171 - -
Bva08g02373 511 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 33 510 - -
Bva08g02373 511 PANTHER FUCOSYLTRANSFERASE 2-RELATED 33 510 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02373 Bva-Chr8 15286181 15287716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02373 41 507 Xyloglucan Fucosyltransferase1 AT2G03220 49.469 7.40e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02373 K13681 - gmx:100809919 636.721