Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02372 ATGGGGTTGAgttccaaaattttgaaagcatCCTTAGTTGTCTTTGCCATAGCTTTCCCTTTGTTGCTCATAGTTACTTTGATGTACCAAAACTCGTTGTATGATCATTTTGAGCAGTTACCAAGAGAGAAGGTATTTGGAGAAAGAATCCAAAACATAACAGTTGAGGGATTGAGAGCAACAGATAAAAGTAATGCGGTGCCAGAGGTTCAGAAAGATTCGTCCCAACAAACAAGAATTACTCGTGAGAAACTGGTTAATGGACTCTTACCTACTTCTGGGTTTGATGAAGAATCATGTTTAAGCAGGTTTGAGTCTTACTTATACCGCAAGACTTCCCCCCATAAACCTTCTCCATATCTGATATCCAAACTGCGCAACTATGAGAAACTTCACCAAAGATGTGGACCGCATACCAGATTCTACAACAGAACcataataaagataataaaatctGGGACCAAGGGAGCTGCAACAAATTGTAAATACATTGTTTGGACACCTGCCAATGGCTTAGGTAACAGAATGATGAGCATGGTTGCCACATTTCTCTATGCAGTCCTCACAGAACGAGTGCTACTAGTTCAATTTAACACTGACATGGTTGGCCTGTTCTGTGAGCCATTTCCCAGTTCATCGTGGATATTGCCAgagaattttccttttataaacaacaaaagataCAAGGAAACTTATGAAAGCCTGCTGCATAAGGACAAGGAGAACAATTCACAGTTGATTGCACCATCAGTTTTACATCTTAATCTACAGCACACCCATAATAGTCCTGAAAGGTTTTTCCACTGTGATCATAGTCAAGACCTTCTCCAGAAAGTTGCTGTGTTGATTTTCATGTCAGATCAATATTttgtctcttctcttttcataatttcatcttttaaccAAGAGCTAAGCAAAATGTTCCCAAAGAAGGACACAATTTTTCACTACTTGGGACGCTATCTTTTTCATCCTTCAAATGAGGTATGGGGGACAATCAACAGGTTCTATCAAGCATACCTAGCTAAGGCAGATGAGAGGGTTGGCCTCCAAATAAGATTATTCAACCCAGATCTCACACCATACGAAACAATTATgggtcaaattttaaattgcacCTTACAACACAAGATACTGCCAGAATTAGACACAAGAAATGGAGCTGTAGCTTCTCCAAGAAAAACCCAGACTTTGAAATCTGTTCTGGTAGCATCTCTGCATCCAGAGTATGGTGAGAATCTAAAGGCTATGTATTTATCAAAACCAACTGTTACTGGGGAGATCGTAGGAGTTTATCAGCCTAGTCACGAAGAGAAGCAAAAGTCTTTTGATAACACACACAACATAAAGGCTTTGACAGAAATGTATCTACTAAGCTTTTGTGATGTTTTGGTGACAAGTTCTGCATCTACATTTGGGTACGTGGCTCAAAGTTTGGGAGCCTTGAAGCCATGGATTCTTCATAAGGCACTAGACGCCAACATCCCAAGTCCAGCTTGTGTACGAGACTTCTCTATGGACCCGTGTTATCATCATCCTCCGACACACGATTGCAGAGGAAACTCCGCACACGATCTTCCTTATACAAGCAAGTGTGCAGATTATTCATTTGGAGTGAAGCTAAGCTA 1628 0.3808 MGLSSKILKASLVVFAIAFPLLLIVTLMYQNSLYDHFEQLPREKVFGERIQNITVEGLRATDKSNAVPEVQKDSSQQTRITREKLVNGLLPTSGFDEESCLSRFESYLYRKTSPHKPSPYLISKLRNYEKLHQRCGPHTRFYNRTIIKIIKSGTKGAATNCKYIVWTPANGLGNRMMSMVATFLYAVLTERVLLVQFNTDMVGLFCEPFPSSSWILPENFPFINNKRYKETYESLLHKDKENNSQLIAPSVLHLNLQHTHNSPERFFHCDHSQDLLQKVAVLIFMSDQYFVSSLFIISSFNQELSKMFPKKDTIFHYLGRYLFHPSNEVWGTINRFYQAYLAKADERVGLQIRLFNPDLTPYETIMGQILNCTLQHKILPELDTRNGAVASPRKTQTLKSVLVASLHPEYGENLKAMYLSKPTVTGEIVGVYQPSHEEKQKSFDNTHNIKALTEMYLLSFCDVLVTSSASTFGYVAQSLGALKPWILHKALDANIPSPACVRDFSMDPCYHHPPTHDCRGNSAHDLPYTSKCADYSFGVKLS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02372 542 Gene3D - 328 490 - -
Bva08g02372 542 Gene3D - 158 206 - -
Bva08g02372 542 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 5 541 - -
Bva08g02372 542 PANTHER FUCOSYLTRANSFERASE 2-RELATED 5 541 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bva08g02372 542 Pfam Xyloglucan fucosyltransferase 74 519 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02372 Bva-Chr8 15282336 15284291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02372 78 541 Xyloglucan Fucosyltransferase1 AT2G03220 48.739 4.65e-161 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02372 K13681 - gmx:100809919 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02372 08 15282336 15284291 Bva02g02588 02 24201121 24203311 PCT