Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02160 atgcaagACCCAGCATTTCACTCAATGAAACCCCACTTTCCTGAACAAGAACAACTGAAATGTCCACGCTGTGAGTCCACAAACACCAAATTCTGCTACTACAACAACTATAACCTCTCGCAGCCACGCCATTTTTGCAAGAACTGCAGAAGATATTGGACCAAAGGAGGTGCTCTCCGCAATATCCCAGTGGGCGGTGGATGCCGAAAGACCACAAAGCGATCTTCAAACGCCAAACgctcatcatcttcttcttcttctccaccTGTTTCATCTTCCTCTGTAGCCCAGACTACTGTTCCTGAGGAGGATCCGACCCGGGCTTATTCTAACTCGACAGATCAAGAGAAACCCGTGTTAAACATTGGTGGGAGCTTCAGTTCGCTTCTTGCATCTAGTGGGCATTTGGGTAGTCTATGGGAGGGTGTGAATTCAAATGGGTCTACTGTAAAAATGGTTCAATTGGGTGCATTTGGGGAGAATGTGAGTTCTAATCCATTGTTGAATTCGAATTCGGGTAGAAATCCTGGGCTGGAGATACAGAGCAATGGAAGTTCGGAGGGCTTTCTGGGTTTGCAGAATGGTGGTTCAAGCTGTTGGAATGGTGGCAATGGGTGGTCAGATCTTTCAATCTATACACCAAGTTCAAGCTATCTGTA 659 0.4401 MQDPAFHSMKPHFPEQEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKTTKRSSNAKRSSSSSSSPPVSSSSVAQTTVPEEDPTRAYSNSTDQEKPVLNIGGSFSSLLASSGHLGSLWEGVNSNGSTVKMVQLGAFGENVSSNPLLNSNSGRNPGLEIQSNGSSEGFLGLQNGGSSCWNGGNGWSDLSIYTPSSSYL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02160 219 MobiDBLite consensus disorder prediction 77 117 - -
Bva08g02160 219 MobiDBLite consensus disorder prediction 64 117 - -
Bva08g02160 219 ProSitePatterns Zinc finger Dof-type signature. 21 57 IPR003851 GO:0003677|GO:0006355
Bva08g02160 219 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 218 IPR045174 GO:0003700|GO:0006355
Bva08g02160 219 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 3 218 - -
Bva08g02160 219 ProSiteProfiles Zinc finger Dof-type profile. 19 73 IPR003851 GO:0003677|GO:0006355
Bva08g02160 219 Pfam Dof domain, zinc finger 17 73 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02160 Bva-Chr8 14228146 14229530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02160 10 139 C2C2-Dof Transcription Factor Family AT1G51700 55.147 5.72e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva08g02160 zf-Dof 8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02160 - - zju:107403899 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02160 08 14228146 14229530 Bva08g02160 08 14228146 14229530 ECH
Bva08g02160 08 14228146 14229530 Bva02g02311 02 22842723 22844745 PCT