Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01714 atgggttCCGGTATGGAGTTCTTTCGTCGAACTCTTTTCCTAGTAGTAATCTGCGCTCTTGCTGCCGCATCAAACGCTCAGTATGAGGTTTCGACAGATAGGAAGTTCAAGTGCAGCACAGAGGGAGCAACGTGTCTCGCCCTGGTCGATTACAGGCCTGCCAGCGGCACTTACGGTGGCATTCAAACCCTCTTCAACATTAGAGAGCTTAGGGACATTCAGGGTGTGAACTTACAGCTCAAAGATACCATCTCACCAAACGATCAGGTGATCCCACTGGGCGTAATTCGAATCCCTTTCACTCGCAAATGCCAAGATGCGTTAGGTACGTCCATTAACGGCCCCTTCTATAAGATCCAATCGGACGAAACATTGGAACATATAGGGAAAGTGGTGTTTTCCAATATAGTCAAGTGGCCGCAAATCCAAAAGGCTAATAATATTTCTGACCCATTCAACATATCTATGGGGCAGGAGCTGCGGATTCCACTGCCTTGTAGCTGCGATCAGGTGGAGGGAACCATGCTGGTCCATTACGGACGCGTGTTCCAAAATATCTCAACTAGCTATCTTGAAGAGATGGCACAGACGGCCGGCATCGCAGTGGAAACCATGAAGGATCTGAACGGAATTCTTGATGAAAGCCAAATTCAGGCCGGTGAGATTTACGATGTGCCGCTTAAAGGTTTGTTCTGTTCTTCTTCCTA 707 0.4752 MGSGMEFFRRTLFLVVICALAAASNAQYEVSTDRKFKCSTEGATCLALVDYRPASGTYGGIQTLFNIRELRDIQGVNLQLKDTISPNDQVIPLGVIRIPFTRKCQDALGTSINGPFYKIQSDETLEHIGKVVFSNIVKWPQIQKANNISDPFNISMGQELRIPLPCSCDQVEGTMLVHYGRVFQNISTSYLEEMAQTAGIAVETMKDLNGILDESQIQAGEIYDVPLKGLFCSSS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01714 235 SMART LysM_2 189 226 IPR018392 -
Bva08g01714 235 SMART LysM_2 116 163 IPR018392 -
Bva08g01714 235 CDD LysM 116 162 IPR018392 -
Bva08g01714 235 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 17 234 - -
Bva08g01714 235 Gene3D LysM domain 114 173 IPR036779 -
Bva08g01714 235 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 17 234 - -
Bva08g01714 235 ProSiteProfiles LysM domain profile. 115 162 IPR018392 -
Bva08g01714 235 Pfam LysM domain 117 163 IPR018392 -
Bva08g01714 235 SUPERFAMILY LysM domain 116 164 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01714 Bva-Chr8 11058075 11058782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01714 35 235 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 38.614 3.29e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01714 - - jcu:105630073 161.384