Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01706 ATGGAGGATCGGTGGAAGGAGCGGAATGGGAATTACGATCAGTTGTTATCTGATTACGATGATGCTGTAGATCGAGATTTTCCCAGTAGAGAGAATAGCCCAGCAATTCTGCCCATTTCGTCAACGTCGGATTCTTCATCTCCTCGTAGACTTGGCTACATTGAACACCGGGTTTCCAAATTCGATACTCTTGCTGGCGTTGCAATCAAATATGGCGTCGAGGTTGCAGATATTAGAAGGATGAATGCCCTTGTTACAGATCATCACATGTTTGCTCTTAAGTATCTCCAGATTCCTCTACCTGGAAGGCACCCTCCATCTTCATCCTTAACAAATGGTTCTGATTCTACAAAACCTGGCAGCTCTGACGATAATTCAACTGGCCATCTGCACCATGAATTCTTTGACTCATTCCAGTCCTTAAGAAAGAAGCATTCCCAATGGAAGGTCTCCCCGGCCATGAGCTCTTTACAAGGTTATTATGGACTAAAGCCAGCAGATAGAATGCCTGAAGGCTTTGAGATGGCATTACATAGCAAGGACAATTTAAATTCTTCAGAAAATGGTTCACCCTCCAGGAACTCACCTATGTCCGACCAACCTCTTGGCCTTCATAGAAAATCTAGAAGTATGGCTAATGAACTTATGGATGAGATTTTTAAACAATCTGATATAGAGACTGTTTCAGAACCCAGAGAAGGTAACTCAGATAGATGGAATGATAAGCTTTTCAGGAGACGCCAGAAATCTGAAGCTGACTTTACTCGATCGCATGGCTTGCTTATGAAGGAGGAAAATGGCAGCAGTAGTGGGTTTTCAGCCAGAACAGGAAAGGGATTAGCTCAGAGACCAAAAGCAGCTGGCCGAACTGCGTTGACTTCTGATTTGGACGCAAGTGGCTTGAATCCTGTGCCAATAGGTTTGGGAGATGTTTTTCTAACTGATGGACCATCTGGGGTGCGAAAATCATCAAGCATGACATGTTTACATGAGCAGGATAACAAGTCCTCGTCCCTTCGGCCAACCTCACGAGCCATTGCAAAACCAATCTTTGATGGCTTGTCCATGCCGATGACCGGTCGGAAAAACAAAACTGCACTTGATTA 1106 0.4439 MEDRWKERNGNYDQLLSDYDDAVDRDFPSRENSPAILPISSTSDSSSPRRLGYIEHRVSKFDTLAGVAIKYGVEVADIRRMNALVTDHHMFALKYLQIPLPGRHPPSSSLTNGSDSTKPGSSDDNSTGHLHHEFFDSFQSLRKKHSQWKVSPAMSSLQGYYGLKPADRMPEGFEMALHSKDNLNSSENGSPSRNSPMSDQPLGLHRKSRSMANELMDEIFKQSDIETVSEPREGNSDRWNDKLFRRRQKSEADFTRSHGLLMKEENGSSSGFSARTGKGLAQRPKAAGRTALTSDLDASGLNPVPIGLGDVFLTDGPSGVRKSSSMTCLHEQDNKSSSLRPTSRAIAKPIFDGLSMPMTGRKNKTALD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01706 368 PANTHER LOC443603 PROTEIN-RELATED 42 368 IPR045030 -
Bva08g01706 368 MobiDBLite consensus disorder prediction 34 49 - -
Bva08g01706 368 SUPERFAMILY LysM domain 54 99 IPR036779 -
Bva08g01706 368 ProSiteProfiles LysM domain profile. 54 98 IPR018392 -
Bva08g01706 368 SMART LysM_2 55 99 IPR018392 -
Bva08g01706 368 MobiDBLite consensus disorder prediction 262 276 - -
Bva08g01706 368 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 42 368 - -
Bva08g01706 368 MobiDBLite consensus disorder prediction 181 204 - -
Bva08g01706 368 MobiDBLite consensus disorder prediction 23 49 - -
Bva08g01706 368 MobiDBLite consensus disorder prediction 222 260 - -
Bva08g01706 368 MobiDBLite consensus disorder prediction 181 201 - -
Bva08g01706 368 Gene3D LysM domain 39 109 IPR036779 -
Bva08g01706 368 MobiDBLite consensus disorder prediction 222 284 - -
Bva08g01706 368 MobiDBLite consensus disorder prediction 103 130 - -
Bva08g01706 368 MobiDBLite consensus disorder prediction 104 124 - -
Bva08g01706 368 CDD LysM 54 98 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01706 Bva-Chr8 10028995 10031887 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01706 08 10028995 10031887 Bva08g01706 08 10028995 10031887 ECH