Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01680 ATGGCTCCTGCGCGTAGACGCGGAGCGAACAAGGCCAAGGCTAATGGGCAGCTGAGGTTGGGCGATCTTGTGCTTGCTAAGGTCAAGGGATACCCAGCTTGGCCTGCCAAGATAAGCAGGCCTGAAGATCATGAGAAGGTCCCTGAtccaaagaaatattttgttcaattcttCGCTACAAAAGAGATAGCTTTTGTTGCCCCAGTAGATATTCAGGCATTTACCAATGAGGTTAAGAATAAGTTGTCAGCTAGGTGTCAAGGCAAGACAACGGTCTTCGCCCAAGCTGTGAAGGAAATCTGCACAGCATTTGATGAATTACAAGAGCAGAGTGCTAGTGGTTTGAGAGATGACACCGATGATTCACGTGTTGGTTCAGAGGCTCCTTCTCTTGATGGTGTTGTGGCTGATTTAAAGGATGCTAATGGTGATGTGGTACTGGCTGAAGAAAAAGACGACAATTGTGTAAGTAATGCAGGATCTAAGTTGGAACGCTGCTCACAGAGATGTGGAGAAAGTGATAGTCAAGATGAAAAACCCACTGTATCTGGTAATCCAAATGATAGTTCATCTCCTGTTCTGTCTCCTATGATTAAAAGTAATGCATTCAATGTTTCAAGTGTAAAGCAAGAGGCTAGCACATCTAGTCTTAAGGACCCATTGTCTTTGAAGGTGGAAGTTTCTGACTGGAAGGGTGCAAGTGGTATAGATGATTCTAAGGAAGATGATAATGGGCATAGGGCGTTGACTAGTGGAAACAAGTCTAAAAAGCCTGGAACTAACTCAAGAAGTAGAAGTGAGGGTGCAGGTGATAGAAATAAAAGTGGTGGCTCTGCTGGAAGAGGTTGTGCTGACCTTTCCAAGTCTGGGGAATCGGTGAAAAGTGGAAAGAAGGCTAAAAATTCATTTGGTGTTAGATCTGATTCTCCAGATGCTCCTAAGTTGGATGCTGGTTTTAATAGTGGAAAAAAAGACAAGAGTAGAAGTAGTTTTAAGGTAAAGAATGAGTTGCAGGAGGCCCTGGATGATTCTGAGGAGTCTGATGTCAAAATTTCTGTTAAGCAAAAGAAGACTCAACTTGCTAATACAAAGCGTAATTTGGGATCAAATGATACTTTGCATGCTAAGAAGAAGTTGAAGCATACGGACTCAAACAATGATACAAGTTTTGGATCTATGCGGAAAGGTGCTAAGACTGCTTCACCTGGTTCTACTGTTGTTGATGacaaagtatttaaaaaatcagaGTTGAAAAGGTCCACATCATGtgcaaaagttgaaaaaagcTTGACACCAAGAGGTCAAACTGGTGTTCTAGGTTCTGATGATTCTGTTGATGGAGTTGTGCCACCAGGGAGAAAAAATCATGGCCAAGTTCAGCAGTCTGTTCCTGATTCTGCTACCCTTGCAACTGGTGAAAAAACAGAAAGGTCTTCTCTTAGACTGAAAAGCGATGCAGATAATTCTATGGGGAAACCATTACAAAGGAAGCGTAGAGCTGTTTGCCTATTTAGtagtgatgatgatgaggaaCCGAAGACTCCAGTTCATGGAGGAGCCTCAAAAAATATCAGATCACCTTCACATGTTTCAGAGGGCTCGAAAGACAATAACGCACATGCTCAGAATTCCAAAATAGAGAGGTCTTCTCTTGGAGTTTCTACTGGACTTGAGGATAATAGCCATTTGAAAGAACCATCTTCTAGGTTGCAGAATGACTGTTTGTCCAATAGCCAGACTCAAAAAGAGGATAAGAGGACTGGAGGAGTAATCCCTGCCCAAGTTTCCTCTAGTCCTGATAAATCAGACTCAAGGGTGGCAAAGTCCACTTCTCCAGTAAAATCACCTCAGTCCGTACCTGCAAACAAGTTAATAGTCGAGGGGAGTAAATCTTCCAAACCTGTGATTAAAGTGTCCACTGGTACTACTCAATTGAAGGGTGATATTGGGTCTTTAAAGGGCACTAGCTCTTCTCAAAACCATGTAACAGCACATAAAAAGAAGCCTGCTTCTTCAGCTGAAATATCTAAAAGTACTCCAAAGTCAAATACGCGGCCAGTTGAGGCTCCTGCCCCCACAGAGAATTTGAAGGAGTCTAATGCTTTTCATGTTGATAGATTAGAAATGGGCgtggaagaaaaaataagtgtcCTGTATACTGGTTCTCGGACTCCAGAATCTGCTATATCTATGAAAGATCTTATTGCAGCTGCCCAGGCCAAAAGGAGACAAGCTCattctcaatttcttcctcttgGAATTCACAATTTCCAGGGGAGAACTCCAAGCCCCTCCACAGTTCAGCCACTTTTGGCTCTCTCAAGCAATTTTGTACAGGAAGATGTACAGGGAGCATATGAGCACCCAACATCAGCTTCTCCATCAGCTAATGGACATCATTCTGtatctcaaaatcaatttaatgcTGAAGAAATCGAAGAGAGAAGAGTTGGTTCAGTGCAAATGGCTCCTGGGGGCTCCCTAAGTGGTGATACTGAGGCTGCTGTTGCTCGTGATGCTTTTGAAGGAATGATAGAGACTTTATCAAGGACCAAGGAAAGTATTGGACGTGCCACACGTCTTGCAATTGATTGTGCGAAGTATGGCATTGCCAATGAGGTTGTTGAACTTCTCATCCGAAAGCTGGAAAGTGAATCTAGTTTTCATCGCAAAGTAGatttgttctttcttgttgATTCCATCACTCAGTGTTCACATAATCAAAAAGGCATTGCGGGAGCCTCATACATCCCTACAGTTCAAGCAGCATTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCAGGACCTGGTGCCCGTGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTTTCTGAATCTGTTCTTCGCCGGCACATGGATGATGTTGGGGTTTCCAATGATGATATGACCATTAGCTTATCTCTCAGGCGTCCTTCTCGATCAGAGCGGGCAGTGGATGACCCAATTAGGGAAATGGAAGGCATGCTTGTTGATGAGTACGGAAGTAATGCTACATTTCAGCTGCCTGGctttttatcttcaaatgTGTTTGAAGAAGATGACGAGGATGATGATCTTCCTAGTAGTTTGGTTAAGGACACATCTGATGCCTCGCTGGCAGACCCTACTCATACTCTTGGAGAATCAGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTGGAGGATGTGGATGGTGAGCTTGAAATGGAAGATGTTTCAGGTCACTTGAAGGATGAAGGACCTGTGTTATTGAATAGTTCTTCTGAAATGGATTCACAACTTCAGGGCTCAGATAGGAATTTAGATCAAGCTTCAATCATATCTGTGCAGATACCTGCTATGCCTGATGGTTCACCTCCATTGCCTCTTGATTCTcctcctccaccaccacctttACCTTCTTCACCTCCGCCACCTCCTCCTCCATTATCTCCTCCACCACCCCCACCACCCCCAATGTCACATCTCCCACCTCCTCCTCTACCCTCTGGTCCTCCACCTCCTCCTCTACACTCTGGCCCTCTGCCTCCTCCATTACACTCTGGCGCTCCACCTCCTCCCTTACCCCCTCCACCAACTTTGGCTCCTCAATCATCTGGACCAGCTCGGCCTTCATTGCTCCCTCAGCCATTGATGCCGTCTCAATCATCACTTCAGTTTCCACAGCCATCTTCTTGTTTTGCCCCAACAGCAGGTTGCAACTCTCAGGAAGCTTCCACCTTTAATCATTCAAGACAACCAGAGTATGGGCAGAATGATGTGTATTTAAACCCCCAAATTCCTCAACCCAACCAGCAATCTCAGCCGGTTAACACCCCATTTACTCAGAGACAGATACATTCTGCCCCTCCCCAGAATCCGTCAAATCAATTCTCATATCCAAACCCTGCAGTTCAGCAACATCTTCCGCATTCATTCCATCCTTCCTACTCTCTCCCATCCCTTCCTGATGGTCGGAGGCAATATGTTGCTGATGAACAATGGAGGATGCCATCAAATGAATTTAACACAAACAATCAACACGGAGTATGGAGAGGGAGAAATCCTTCATGTGCTGGTCCACCCCATGGGCAGGAAGGTTATTTTCGGCCACCCCTTGAAAGGCCACCCACAAGCAACACAGGTTTTCAGCATGGTGCCCCAAGCAATTTACCTGTTACCCCTCCAATATCAGgACACGGTGTTCATCAGATGTTTCCCTGTAGGCCAGACGTTCCCACACTTAATTGTTGGAGACCAACATG 4280 0.4327 MAPARRRGANKAKANGQLRLGDLVLAKVKGYPAWPAKISRPEDHEKVPDPKKYFVQFFATKEIAFVAPVDIQAFTNEVKNKLSARCQGKTTVFAQAVKEICTAFDELQEQSASGLRDDTDDSRVGSEAPSLDGVVADLKDANGDVVLAEEKDDNCVSNAGSKLERCSQRCGESDSQDEKPTVSGNPNDSSSPVLSPMIKSNAFNVSSVKQEASTSSLKDPLSLKVEVSDWKGASGIDDSKEDDNGHRALTSGNKSKKPGTNSRSRSEGAGDRNKSGGSAGRGCADLSKSGESVKSGKKAKNSFGVRSDSPDAPKLDAGFNSGKKDKSRSSFKVKNELQEALDDSEESDVKISVKQKKTQLANTKRNLGSNDTLHAKKKLKHTDSNNDTSFGSMRKGAKTASPGSTVVDDKVFKKSELKRSTSCAKVEKSLTPRGQTGVLGSDDSVDGVVPPGRKNHGQVQQSVPDSATLATGEKTERSSLRLKSDADNSMGKPLQRKRRAVCLFSSDDDEEPKTPVHGGASKNIRSPSHVSEGSKDNNAHAQNSKIERSSLGVSTGLEDNSHLKEPSSRLQNDCLSNSQTQKEDKRTGGVIPAQVSSSPDKSDSRVAKSTSPVKSPQSVPANKLIVEGSKSSKPVIKVSTGTTQLKGDIGSLKGTSSSQNHVTAHKKKPASSAEISKSTPKSNTRPVEAPAPTENLKESNAFHVDRLEMGVEEKISVLYTGSRTPESAISMKDLIAAAQAKRRQAHSQFLPLGIHNFQGRTPSPSTVQPLLALSSNFVQEDVQGAYEHPTSASPSANGHHSVSQNQFNAEEIEERRVGSVQMAPGGSLSGDTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLESESSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPPGPGARENRRQCLKVLRLWLERKIFSESVLRRHMDDVGVSNDDMTISLSLRRPSRSERAVDDPIREMEGMLVDEYGSNATFQLPGFLSSNVFEEDDEDDDLPSSLVKDTSDASLADPTHTLGESETSTVTPNDKRHCILEDVDGELEMEDVSGHLKDEGPVLLNSSSEMDSQLQGSDRNLDQASIISVQIPAMPDGSPPLPLDSPPPPPPLPSSPPPPPPPLSPPPPPPPPMSHLPPPPLPSGPPPPPLHSGPLPPPLHSGAPPPPLPPPPTLAPQSSGPARPSLLPQPLMPSQSSLQFPQPSSCFAPTAGCNSQEASTFNHSRQPEYGQNDVYLNPQIPQPNQQSQPVNTPFTQRQIHSAPPQNPSNQFSYPNPAVQQHLPHSFHPSYSLPSLPDGRRQYVADEQWRMPSNEFNTNNQHGVWRGRNPSCAGPPHGQEGYFRPPLERPPTSNTGFQHGAPSNLPVTPPISGHGVHQMFPCRPDVPTLNCWRPT 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01680 1426 CDD HDGF_related 16 103 IPR035496 -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 1039 1066 - -
Bva08g01680 1426 Pfam PWWP domain 21 104 IPR000313 -
Bva08g01680 1426 ProSiteProfiles PWWP domain profile. 20 66 IPR000313 -
Bva08g01680 1426 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1165 - -
Bva08g01680 1426 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1169 1426 - -
Bva08g01680 1426 SUPERFAMILY Tudor/PWWP/MBT 16 111 - -
Bva08g01680 1426 Pfam CID domain 840 964 IPR006569 -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 1211 1319 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 370 384 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 231 250 - -
Bva08g01680 1426 SMART PWWP_4 18 75 IPR000313 -
Bva08g01680 1426 Gene3D - 8 115 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 455 475 - -
Bva08g01680 1426 PANTHER PROTEIN HUA2-LIKE 1 1 1165 - -
Bva08g01680 1426 PANTHER PROTEIN HUA2-LIKE 1 1169 1426 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 645 666 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 1097 1111 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 1123 1326 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 112 135 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 501 516 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 354 369 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 424 438 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 418 626 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 177 196 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 251 266 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 1127 1210 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 524 625 - -
Bva08g01680 1426 ProSiteProfiles CID domain profile. 833 974 IPR006569 -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 166 196 - -
Bva08g01680 1426 Gene3D - 832 976 IPR008942 -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 231 405 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 318 353 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 1089 1111 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 385 399 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 673 689 - -
Bva08g01680 1426 SMART 558neu5 840 971 IPR006569 -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 1025 1066 - -
Bva08g01680 1426 MobiDBLite consensus disorder prediction 645 697 - -
Bva08g01680 1426 PRINTS Proline rich extensin signature 1145 1161 - -
Bva08g01680 1426 PRINTS Proline rich extensin signature 1130 1142 - -
Bva08g01680 1426 PRINTS Proline rich extensin signature 1169 1181 - -
Bva08g01680 1426 PRINTS Proline rich extensin signature 1192 1213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01680 Bva-Chr8 9184552 9202023 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01680 08 9184552 9202023 Bva08g01680 08 9184552 9202023 ECH