Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01678 ATGAGGAGTCTCCTTTCGAGCTCGAAGCTCCTATTCGCTACCACTAAGGGTTTCCTCGGCACCACCAAACCAATTGGGCAATGGAGCCGATCTTATAACTTAATCCCAATGGTGATAGAGCACTCTTCCAGAGGAGAGAGGGCATACGACATCTTCTCGCGTCTTCTCAAAGAGCGCATAGTGTGCATCAATGGAGCCATCACCGACGACACTGCCCACGTTGTCGTTGCTCAGCTCCTTTTCCTCGAGTCTGAGAACCCTTCAAAGCCTATCCATATGTACCTCAATTCCCCTGGCGGCGCAGTTACTGCAGGTCTGGCAATTTATGATACTATGCAGTACATTCGTTCTCCGATAAATACAATCTGTTTGGGTCAAGCTGCGTCTATGGGTTCTCTCCTATTGGCTGCAGGTGCCAAGGGTGAGAGGCGGGCTCTTCCAAATGCAACAATTATGATTCATCAGCCTTCAGGTGGATATAGTGGGCAGGCCAAGGATATGACAATCCATACAAAGCAGATTATTCGTGTTTGGGATTCTTTGAATGCATTGTACTCAAAGCATACAGGACAACCAGTAGATATTATCCAGAAGAATATGGATAGGGATTATTTTATGACTCCAGAAGAGGCAAAGGAGTTTGGGATTATTGATGAGGTTATTGACGAAAGACCAGTGGCTTTGGTGGCTGATGCTATTGCTAATGAAAGCAAAGATAAAGGTACAAATTA 731 0.4569 MRSLLSSSKLLFATTKGFLGTTKPIGQWSRSYNLIPMVIEHSSRGERAYDIFSRLLKERIVCINGAITDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYSKHTGQPVDIIQKNMDRDYFMTPEEAKEFGIIDEVIDERPVALVADAIANESKDKGTN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01678 243 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 23 242 - -
Bva08g01678 243 ProSitePatterns Endopeptidase Clp serine active site. 121 132 IPR018215 -
Bva08g01678 243 Gene3D - 26 229 - -
Bva08g01678 243 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 23 242 IPR023562 -
Bva08g01678 243 Pfam Clp protease 44 223 IPR023562 -
Bva08g01678 243 CDD S14_ClpP_2 50 220 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva08g01678 243 ProSitePatterns Endopeptidase Clp histidine active site. 143 156 IPR033135 -
Bva08g01678 243 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 34 224 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva08g01678 243 PRINTS Clp protease catalytic subunit P signature 142 161 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva08g01678 243 PRINTS Clp protease catalytic subunit P signature 50 65 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva08g01678 243 PRINTS Clp protease catalytic subunit P signature 90 110 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva08g01678 243 PRINTS Clp protease catalytic subunit P signature 121 138 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva08g01678 243 PRINTS Clp protease catalytic subunit P signature 199 218 IPR001907 GO:0004176|GO:0004252|GO:0006508
Bva08g01678 243 SUPERFAMILY ClpP/crotonase 42 225 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01678 Bva-Chr8 9165716 9168286 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01678 08 9165716 9168286 Bva08g01678 08 9165716 9168286 ECH