Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01569 ATGGAACACAAAGACAAAGCACCAGCATCCGATCCTCCCACCATCGTCCCCACCGAGTTCAGTAGCGACTCCAGGTGGACACTCGGAGATGATTCGGACGGCCTCTACTTCTTCTCCGGCGACAGAGACAGCATCATACTCAGCGAGTTCGGGTGGAATCTCGACTCGGAACAATCCAACCGGATCGGTCCAGTCGATAGGTCTGAATTTTCCGGAGGAGCAAGTCTGTTGCAGCAACCGAGCTCTGCTGCTTCCGGAGGTTCAGGTTCAAGTGAACCAGCTGATAAGGCCGTTGCCGACGTGTCCACGCCCAATACGGTGTCGTCTAGCTCCAGCGAGGATCCGACGGAGAAGCCTACGAGTTCAGACGGAAAACAGCCCGAGATACCGaggaaaagcaaaaagaaggGCCAAAAGCGAATACGGCAGCCACGTTTTGCATTTATGACTAAGAGTGAAGTTGATCATCTTGAGGATGGTTATAGATGGCGGAAGTATGGTCAAAAGGCCGTAAAAAACAGCCCTTTTCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGCACTGTGAAGAAAAGGGTGGAACGGTCTTCTGAGGACCCAACAATTGTTATTACAACATATGAAGGCCAGCATTGCCATCACACCGTTGGATTCCCTCGAGGAGGTTTCTATGGTCACGAAGCTGCCTTTGGTGGTCAATTGGCGCCTGCAATGTCACCGTTCTATTATCCCATTCAATTACCAAGAGAAAATACTGCTCTTAGCATTTCCCAGCCCCACCAGGCACATGATCATGAAGCTGGAGTGTCCAATGCAATGCCAGAAGCAGCGCCAGAGCATCCGGCCACGGATGAAGGACTACTTGGAGACATTGTGCCCCCTGGAATGCGTAACAGATG 902 0.5044 MEHKDKAPASDPPTIVPTEFSSDSRWTLGDDSDGLYFFSGDRDSIILSEFGWNLDSEQSNRIGPVDRSEFSGGASLLQQPSSAASGGSGSSEPADKAVADVSTPNTVSSSSSEDPTEKPTSSDGKQPEIPRKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGFYGHEAAFGGQLAPAMSPFYYPIQLPRENTALSISQPHQAHDHEAGVSNAMPEAAPEHPATDEGLLGDIVPPGMRNR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01569 300 SUPERFAMILY WRKY DNA-binding domain 149 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01569 300 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 18 231 - -
Bva08g01569 300 MobiDBLite consensus disorder prediction 72 89 - -
Bva08g01569 300 Pfam WRKY DNA -binding domain 158 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01569 300 Gene3D WRKY domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01569 300 MobiDBLite consensus disorder prediction 1 32 - -
Bva08g01569 300 MobiDBLite consensus disorder prediction 275 300 - -
Bva08g01569 300 SMART WRKY_cls 157 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01569 300 MobiDBLite consensus disorder prediction 53 145 - -
Bva08g01569 300 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 231 IPR044810 GO:0003700
Bva08g01569 300 ProSiteProfiles WRKY domain profile. 152 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01569 300 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01569 Bva-Chr8 8241839 8248501 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g01569 WRKY 1.9e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01569 08 8241839 8248501 Bva08g01569 08 8241839 8248501 ECH