Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00665 ATGACAGGGTCGTCAAGAGGAGGCCACGTTTTTAACGAAGACCACAGTGTCCAAGGACTAAAGTTTGGCAAGGTTAAAGATGGTGAAGAGAACCGTCTTGACGCTTATAACTcggataattttataagaaaatccCATGCTTCTAAAATTGATCtagaaacttctccaaatgagTCGTGGTTATCTCCTTTATCCAAGTCTCCTTGGTCTCGGgtgaattcttcttcttccccgGTTACCACCGGAGATACTTCTTCCTGTAACGTTCTCGTGGGCTCATTAATTCGCAAAGAAGGGCACATATACTCACTAGCGGCAACCAAAGATTTGTTATACACCGGATCCGATAGCAAAAACATTCGGGTTTGGAAGAACCAAACCGAATTCTGTGGATTTAAATCCAACAGCGGTTTGGTTAAAGCAATCGTTGTTGCGGGAGAGAAAATCTTAACGGGTCATCAAGATGGAAGGATCCGGGTTTGGAAAGTGTCAAGCAAGCATGAGAACCGGCACAAGCGCGTGGCAACGTTACCCActctaagaaattatattaagtgTGCCATAAAGCCTAGCAATTACGTAGAAGTGAAACGTGAGCGTAACATTCTTTGGATCAAACACTACGACGCCATCTCGTGTCTTGGCTTAACGGAAGACAATTCCCTTATTTACTCGGCTTCTTGGGATAAAACGTTCAAAGTTTGGCGAGCATCGAATTACAAGTGCTTGGAATCCGTGACTGCTCACGACGACGCCGTTAACGCTTTGGTTCTGGGATTCGATGGGTTAGTGTTCACGGGGTCGGCGGACGGCACCGTCAAGATTTGGCGGAGGGAGGTACAAGGAAAAGgaacaaaacattttttttcacaaacgTTGTTGAAGCGAGAGTGTGCTGTAACAGCGTTAACTATAAACCCGGAAGggacatttttatattctggATCTTCTGATGGGCTGGTTAACTATTGGGAGCAAGGGGACACTCTGAAGCACGGTGGCATTTTAAGAGGCCATAAGTTATCGGTTCTATGCTTAGCCATGGCCGGGAACCTTGTATTCAGTGGATCTGCTGATATGGTAATATGCGTGTGGAGGAGATCCAAAATTCATGAGCATATTTGCGTGTCGGTTTTGACGAGCCACactggtccggtgaagtgctTGGCGGTGGAGAAAGACCTTGAAGCAAAGAGCGGCGAGCGATGCTGGATATTATACAGTGGGAGTTTGGACAAGTCGGTTAAGATGTGGAAGGTCTCAGAGCAAGCACCGGTTACCGTGCAAAACCAACCGTCACGTCATAGTGTTGACGCGTATCCGGGATCGGTTTCCAGACTCGCATCCGTGCGAAAAATGGGTGGGTCCAGAAGATACTG 1379 0.4257 MTGSSRGGHVFNEDHSVQGLKFGKVKDGEENRLDAYNSDNFIRKSHASKIDLETSPNESWLSPLSKSPWSRVNSSSSPVTTGDTSSCNVLVGSLIRKEGHIYSLAATKDLLYTGSDSKNIRVWKNQTEFCGFKSNSGLVKAIVVAGEKILTGHQDGRIRVWKVSSKHENRHKRVATLPTLRNYIKCAIKPSNYVEVKRERNILWIKHYDAISCLGLTEDNSLIYSASWDKTFKVWRASNYKCLESVTAHDDAVNALVLGFDGLVFTGSADGTVKIWRREVQGKGTKHFFSQTLLKRECAVTALTINPEGTFLYSGSSDGLVNYWEQGDTLKHGGILRGHKLSVLCLAMAGNLVFSGSADMVICVWRRSKIHEHICVSVLTSHTGPVKCLAVEKDLEAKSGERCWILYSGSLDKSVKMWKVSEQAPVTVQNQPSRHSVDAYPGSVSRLASVRKMGGSRRY 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00665 459 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 365 IPR001680 GO:0005515
Bva08g00665 459 ProSiteProfiles Trp-Asp (WD) repeats profile. 293 325 IPR001680 GO:0005515
Bva08g00665 459 MobiDBLite consensus disorder prediction 56 84 - -
Bva08g00665 459 ProSiteProfiles Trp-Asp (WD) repeats profile. 246 276 IPR001680 GO:0005515
Bva08g00665 459 CDD WD40 98 419 - -
Bva08g00665 459 Pfam WD domain, G-beta repeat 241 276 IPR001680 GO:0005515
Bva08g00665 459 Pfam WD domain, G-beta repeat 98 124 IPR001680 GO:0005515
Bva08g00665 459 Pfam WD domain, G-beta repeat 296 324 IPR001680 GO:0005515
Bva08g00665 459 Pfam WD domain, G-beta repeat 375 419 IPR001680 GO:0005515
Bva08g00665 459 Pfam WD domain, G-beta repeat 207 235 IPR001680 GO:0005515
Bva08g00665 459 Pfam WD domain, G-beta repeat 333 365 IPR001680 GO:0005515
Bva08g00665 459 SMART WD40_4 239 277 IPR001680 GO:0005515
Bva08g00665 459 SMART WD40_4 125 162 IPR001680 GO:0005515
Bva08g00665 459 SMART WD40_4 286 325 IPR001680 GO:0005515
Bva08g00665 459 SMART WD40_4 372 419 IPR001680 GO:0005515
Bva08g00665 459 SMART WD40_4 198 236 IPR001680 GO:0005515
Bva08g00665 459 SMART WD40_4 329 366 IPR001680 GO:0005515
Bva08g00665 459 SMART WD40_4 87 124 IPR001680 GO:0005515
Bva08g00665 459 Gene3D - 43 194 IPR015943 GO:0005515
Bva08g00665 459 SUPERFAMILY WD40 repeat-like 98 428 IPR036322 GO:0005515
Bva08g00665 459 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 246 276 - -
Bva08g00665 459 ProSiteProfiles Trp-Asp (WD) repeats profile. 204 245 IPR001680 GO:0005515
Bva08g00665 459 Gene3D - 289 450 IPR015943 GO:0005515
Bva08g00665 459 PANTHER BNAANNG11810D PROTEIN 5 437 - -
Bva08g00665 459 Gene3D - 195 288 IPR015943 GO:0005515
Bva08g00665 459 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 5 437 IPR045182 -
Bva08g00665 459 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 293 325 - -
Bva08g00665 459 PRINTS G protein beta WD-40 repeat signature 264 278 IPR020472 -
Bva08g00665 459 PRINTS G protein beta WD-40 repeat signature 149 163 IPR020472 -
Bva08g00665 459 PRINTS G protein beta WD-40 repeat signature 406 420 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00665 Bva-Chr8 3429222 3431037 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02042 06 13613771 13615612 Bva08g00665 08 3429222 3431037 ECH
Bva10g00773 10 6219089 6220837 Bva08g00665 08 3429222 3431037 ECH
Bva08g00665 08 3429222 3431037 Bva08g00665 08 3429222 3431037 ECH