Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00600 ATGAAGAGCTCACATTACGTTGGTAATCTACGAACCCAAGTTACCGTAATCGCAGTTTGTCTGGTTGCCTGCTGTTCCAGCCTCAAGATCGGAGAAACCTGTGGGTCAGAGAACAAGTGCGATGCTGGTCTCAAATGTGATACATGCCCAGCAAATGGGAATACCCGATCCAGGTGCACCCGGATCCAGCCTATCGGCCCTACTTCCAAAGTGAAAGGTCTGCCCTTCAACCGGTATACATGGCTGACGACCCACAACTCTTTCGCTCTCGCCGGTGCTAAATCGGCCACCGGTTCTTTCCTTGTAACCCCGATGAACCAGGAAGACACGGTAGCCAATCAACTCAACAACGGCGTTCGAGGCCTGATGTTAGatatgtatgattttttaaacGATATATGGTTATGTCACTCTGCTCAAGGCCAATGTTACAACTTCACTGCATTCCAACCTGCCATAAATGTGCTTAAAGATATTCAAGCATTTCTGGAGAAAAATCCATCAGAAATTGTTACCATCTTCATTGAGGACTATGTAAAATCACCTCAGGGCCTTACCAAGGTCTTTCAAGCTTCTGGGCTGAGCAAGTACATGTTCCCAGTGTCTCGGATGCCCAAGAATGGTGAAGATTGGCCAACCGTCGATGACATGGTCCAGAAGAATCAGCGCTTGGTCGTCTTCACCTCCAAAGCATCCAAGGAATCCTCTGAGGGCATTGCTTACGAGTGGAGATATGTAGTAGAAAATCAATatGGAGATGGTGGGATGAAAGCTGGCTCTTGTCCAAATCGTGCAGAATCACCATCAATGAATACAAAATCAAGGTCCCTGGTTCTCGTCAACTATTTTCGCGATACTCCTAATCGGAGCCAGTCTTGCGCTGACAATTCGGCTCCATTAATTAGCATGATCAAGACTTGCCGTGAAGCAGCTGGCAAACGGTGGCCAAATTTCATTGCTGTTGATTATTACGTGAGGAACGATGGCGGTGGAGCTCCAGAAGCTGTTGATGAAGCAAACGGCCATTTGACTTGCGGATGTGACAACATTGCCTATTGCAAGGAAAACGCAACATTTGGCACGTGTGATGTCCCTCCCATTTCTCCACCTCCGCCAGCAGCGGCCACGGCAACCCCCAGCGGAGGAAACCAGCCAGCCCAAAGTAGTAGTAGCCCCGCAAGTAGTGGTTACATGGATAGACCGGCCAATCTGCTCCAATCGGTTGGGACAATCGTGGCTGCCATAACTTTCTTAACTTGGTTATA 1265 0.4798 MKSSHYVGNLRTQVTVIAVCLVACCSSLKIGETCGSENKCDAGLKCDTCPANGNTRSRCTRIQPIGPTSKVKGLPFNRYTWLTTHNSFALAGAKSATGSFLVTPMNQEDTVANQLNNGVRGLMLDMYDFLNDIWLCHSAQGQCYNFTAFQPAINVLKDIQAFLEKNPSEIVTIFIEDYVKSPQGLTKVFQASGLSKYMFPVSRMPKNGEDWPTVDDMVQKNQRLVVFTSKASKESSEGIAYEWRYVVENQYGDGGMKAGSCPNRAESPSMNTKSRSLVLVNYFRDTPNRSQSCADNSAPLISMIKTCREAAGKRWPNFIAVDYYVRNDGGGAPEAVDEANGHLTCGCDNIAYCKENATFGTCDVPPISPPPPAAATATPSGGNQPAQSSSSPASSGYMDRPANLLQSVGTIVAAITFLTWL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00600 421 PANTHER UNCHARACTERIZED 11 383 - -
Bva08g00600 421 MobiDBLite consensus disorder prediction 370 397 - -
Bva08g00600 421 Gene3D Phosphatidylinositol (PI) phosphodiesterase 67 340 IPR017946 GO:0006629|GO:0008081
Bva08g00600 421 SUPERFAMILY PLC-like phosphodiesterases 73 342 IPR017946 GO:0006629|GO:0008081
Bva08g00600 421 MobiDBLite consensus disorder prediction 377 397 - -
Bva08g00600 421 CDD PI-PLCc_At5g67130_like 67 340 - -
Bva08g00600 421 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 75 183 - -
Bva08g00600 421 PANTHER PLC-LIKE PHOSPHODIESTERASES SUPERFAMILY PROTEIN 11 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00600 Bva-Chr8 3105374 3108521 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00600 08 3105374 3108521 Bva11g01722 11 15485926 15488775 ECH
Bva06g02028 06 13557590 13560905 Bva08g00600 08 3105374 3108521 ECH
Bva10g00787 10 6273335 6274469 Bva08g00600 08 3105374 3108521 ECH
Bva08g00600 08 3105374 3108521 Bva08g00600 08 3105374 3108521 ECH