Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00580 ATGGTTAGAATGACAGTATCCACTTTATTCTTCCTTTCATTCACTTTATCAGCATTTGCTTTGGATATGTCCATCATCAGCTACACACACAGCCATGACGAGCATTTAAACTGGCGAAGCGAAGAGGAGGTTATGTCCATTTATGAGGAGTGGCTGGTTAAGCAccaaaaagtttataatgcGTTGGGAGAGAAGGATAAGAGGCTCCAAGCTTTTAAGGATAACTTGAGGTTCATCGATGAGCATAACGCTCAAAATCGCACATACAAAGTTGGGTTGAATAGGTTTGCTGATTTAACTAACTACGAATACCGTGCTAAATATTTGCGCACAAGACCAGATCCTAAGCGTATGCTCATGAAAGCCAAGAACTCCGGTCACCGATATGCTTATAACGCAGGTGATAAGCTGCCGGTGCATGTCGATTGGAGGGTCAAAGGTGCCGTTAGTCCAATCAAAGATCAAGGAGGCTGCGGAAGTTGCTGGGCGTTCTCGACGGTGGCCACAGTGGAAGCCATAAATAAGATAGTCACCGGCGAGCTTGTCTCTCTGTCCGAACAAGAACTTGTAGACTGCGACAATTCCTACAATAATGGATGCAACGGGGGTGTTCCGGACCACTCCTTTGAGTTCATCATAGGAAATGGTGGCATCGACAGAGAGGATGACTACCCTTACCGGGGTGCTGATGGCAAATGTGATGCAGCTAGGAAAAATGCTAAGGTAGTGAGCATTGATGGGTACGAGGATGTTCCAACATTTGACGAGAATGCATTGAAGAAAGCCGTAGCCCATCAACCTGTCAGCGTTGCTATTGAAGCCAGTGGAAGGGTTTTGCAACTCTACCATTCGGGTGTCTTCACTGGTGAATGTGGGACAAGTTTGGACCATGCTGTGGTCGCTGTTGGATATGGCACTGATAATGGTGTTGATTATTGGCTGGTGAGGAACTCATGGGGCACTGGCTGGGGTGAGGATGGTTACATCAGGATAGAGCGTAATGCCCAAACTAACACTGGAAAGTGTGGAATTACAATGATGGCCTCATACCCTGTTAAGAAAGGCCAAAACTCTGCAAATCCCacagaaatgaaaattagcagtgcttg 1109 0.4482 MVRMTVSTLFFLSFTLSAFALDMSIISYTHSHDEHLNWRSEEEVMSIYEEWLVKHQKVYNALGEKDKRLQAFKDNLRFIDEHNAQNRTYKVGLNRFADLTNYEYRAKYLRTRPDPKRMLMKAKNSGHRYAYNAGDKLPVHVDWRVKGAVSPIKDQGGCGSCWAFSTVATVEAINKIVTGELVSLSEQELVDCDNSYNNGCNGGVPDHSFEFIIGNGGIDREDDYPYRGADGKCDAARKNAKVVSIDGYEDVPTFDENALKKAVAHQPVSVAIEASGRVLQLYHSGVFTGECGTSLDHAVVAVGYGTDNGVDYWLVRNSWGTGWGEDGYIRIERNAQTNTGKCGITMMASYPVKKGQNSANPTEMKISSA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00580 369 SMART Inhibitor_I29_2 48 104 IPR013201 -
Bva08g00580 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 312 331 IPR025661 -
Bva08g00580 369 PRINTS Papain cysteine protease (C1) family signature 297 307 IPR000668 GO:0006508|GO:0008234
Bva08g00580 369 PRINTS Papain cysteine protease (C1) family signature 155 170 IPR000668 GO:0006508|GO:0008234
Bva08g00580 369 PRINTS Papain cysteine protease (C1) family signature 312 318 IPR000668 GO:0006508|GO:0008234
Bva08g00580 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 295 305 IPR025660 -
Bva08g00580 369 Pfam Papain family cysteine protease 137 352 IPR000668 GO:0006508|GO:0008234
Bva08g00580 369 SMART pept_c1 137 352 IPR000668 GO:0006508|GO:0008234
Bva08g00580 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 155 166 IPR000169 -
Bva08g00580 369 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 31 359 - -
Bva08g00580 369 CDD Peptidase_C1A 138 351 IPR039417 -
Bva08g00580 369 Pfam Cathepsin propeptide inhibitor domain (I29) 48 104 IPR013201 -
Bva08g00580 369 Gene3D Cysteine proteinases 26 354 - -
Bva08g00580 369 SUPERFAMILY Cysteine proteinases 40 352 IPR038765 -
Bva08g00580 369 PANTHER CYSTEINE PROTEASE 31 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00580 Bva-Chr8 2988983 2991014 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00580 08 2988983 2991014 Bva11g01740 11 15610696 15612496 ECH
Bva06g02115 06 13996180 13999287 Bva08g00580 08 2988983 2991014 ECH
Bva10g00690 10 5775757 5779465 Bva08g00580 08 2988983 2991014 ECH
Bva08g00580 08 2988983 2991014 Bva08g00580 08 2988983 2991014 ECH